Repository 'bamtools_split_mapped'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bamtools_split_mapped

Changeset 2:6dbef7ea2253 (2023-01-13)
Previous changeset 1:f2c21525a960 (2023-01-11) Next changeset 3:fa7b5520ae53 (2024-03-15)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/bamtools/bamtools_split commit 862f05b5053f55def8007194a702019418697cb5
modified:
bamtools_split_mapped.xml
macros.xml
removed:
test-data/bamtools-split-test1.bam
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diff -r f2c21525a960 -r 6dbef7ea2253 bamtools_split_mapped.xml
--- a/bamtools_split_mapped.xml Wed Jan 11 13:37:46 2023 +0000
+++ b/bamtools_split_mapped.xml Fri Jan 13 12:18:06 2023 +0000
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@@ -1,5 +1,5 @@
-<tool id="bamtools_split_mapped" name="Split BAM by Mapped" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
-    <description></description>
+<tool id="bamtools_split_mapped" name="Split BAM by reads mapping status" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
+    <description>into a mapped and an unmapped dataset</description>
     <macros>
           <import>macros.xml</import>
     </macros>
@@ -34,12 +34,9 @@
 
 -----
 
-.. class:: warningmark
-
-
 **How it works**
 
-Splits the input BAM file into 2 output files named (MAPPED) and (UNMAPPED) containing mapped and unmapped reads, respectively.
+Splits the input BAM file into 2 output files containing mapped and unmapped reads, respectively.
 
 -----
 
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diff -r f2c21525a960 -r 6dbef7ea2253 macros.xml
--- a/macros.xml Wed Jan 11 13:37:46 2023 +0000
+++ b/macros.xml Fri Jan 13 12:18:06 2023 +0000
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@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <macros>
     <token name="@TOOL_VERSION@">2.5.2</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">bamtools</requirement>
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diff -r f2c21525a960 -r 6dbef7ea2253 test-data/bamtools-split-test1.bam
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Binary file test-data/bamtools-split-test1.bam has changed