| Previous changeset 7:f5643712dca7 (2022-01-31) Next changeset 9:468b90c41cde (2023-06-21) |
|
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/artic commit 42a048391200da4c664650f7e7665c97ace584ee" |
|
modified:
artic_minion.xml |
| b |
| diff -r f5643712dca7 -r 6f52ebc01098 artic_minion.xml --- a/artic_minion.xml Mon Jan 31 10:12:30 2022 +0000 +++ b/artic_minion.xml Mon Feb 07 09:41:30 2022 +0000 |
| b |
| @@ -40,7 +40,7 @@ "'"'${read_file.element_identifier}'"'" && bgzip -f '${read_file.element_identifier}.fail.vcf' ## remove enclosing single-quotes from header of output consensus fasta - && sed -i "1s/'${read_file.element_identifier}'/${read_file.element_identifier}/" ${read_file.element_identifier}.consensus.fasta + && sed -i "1s/'${read_file.element_identifier}'/${read_file.element_identifier}/" '${read_file.element_identifier}.consensus.fasta' ]]></command> <inputs> <param argument="--read-file" type="data" format="fastq,fastqsanger,fastq.gz,fastqsanger.gz" label="Input Read File"/> |