| Previous changeset 12:49fb5138448c (2017-06-14) Next changeset 14:c3b28b232e64 (2017-06-14) |
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modified:
GRsetFromGEO/GRsetFromGEO.R GRsetFromGEO/GRsetFromGEO.xml |
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| diff -r 49fb5138448c -r 6f7428f907da GRsetFromGEO/GRsetFromGEO.R --- a/GRsetFromGEO/GRsetFromGEO.R Wed Jun 14 11:58:44 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.R Wed Jun 14 12:07:05 2017 -0400 |
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| @@ -1,6 +1,5 @@ -require("minfi", quietly = TRUE) - options(warn = -1) +options('download.file.method'='auto') args <- commandArgs(trailingOnly = TRUE) GSE = args[1] |
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| diff -r 49fb5138448c -r 6f7428f907da GRsetFromGEO/GRsetFromGEO.xml --- a/GRsetFromGEO/GRsetFromGEO.xml Wed Jun 14 11:58:44 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.xml Wed Jun 14 12:07:05 2017 -0400 |
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| @@ -1,7 +1,6 @@ <?xml version="1.0" encoding="UTF-8"?> <tool id="GetGEO" name="GRsetFromGEO" version="1.16.2"> <requirements> -<requirement type="package" version="1.20.0">gnu-wget</requirement> <requirement type="package" version="1.20.0">bioconductor-minfi</requirement> </requirements> <stdio> |