| Previous changeset 5:97f1c89cd831 (2013-03-04) Next changeset 7:3f0cb90824f1 (2013-03-05) |
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Commit message:
Uploaded |
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modified:
protein_prophet.xml |
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| diff -r 97f1c89cd831 -r 7005346b534d protein_prophet.xml --- a/protein_prophet.xml Mon Mar 04 19:09:54 2013 -0500 +++ b/protein_prophet.xml Mon Mar 04 19:20:05 2013 -0500 |
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| @@ -8,7 +8,7 @@ <!-- Note .. the input file is assumed to be the first argument --> - <command>protein_prophet_wrapper.rb --galaxy $input_file -r $iproph $nooccam $groupwts $normprotlen $logprobs $confem $allpeps $unmapped $instances $delude --minprob=$minprob --minindep=$minindep </command> + <command interpreter="ruby">protein_prophet_wrapper.rb --galaxy $input_file -r $iproph $nooccam $groupwts $normprotlen $logprobs $confem $allpeps $unmapped $instances $delude --minprob=$minprob --minindep=$minindep </command> <inputs> <param name="input_file" type="data" format="peptideprophet_pepxml,interprophet_pepxml" multiple="false" label="Peptide Prophet Results" help="These files will typically be outputs from peptide prophet or interprophet"/> |