| Previous changeset 10:f78ed0f61f52 (2015-12-21) Next changeset 12:c3f2ecec9fb8 (2016-06-30) |
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Commit message:
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modified:
phe_samtools_mpileup.xml |
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| diff -r f78ed0f61f52 -r 714a4c13d64c phe_samtools_mpileup.xml --- a/phe_samtools_mpileup.xml Mon Dec 21 10:17:45 2015 -0500 +++ b/phe_samtools_mpileup.xml Mon Dec 21 10:17:56 2015 -0500 |
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| @@ -4,6 +4,11 @@ <requirement type="package" version="1.1">samtools</requirement> <requirement type="package" version="1.3">bcftools</requirement> </requirements> + <stdio> + <!-- Assume anything other than zero is an error --> + <exit_code range="1:" /> + <exit_code range=":-1" /> + </stdio> <command interpreter="bash"> phe_samtools_mpileup.sh $input_bam $ref_file $outvcf </command> |