| Previous changeset 2:8dee0218ac7d (2020-09-03) Next changeset 4:a7b889b90140 (2021-07-20) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/miniasm commit 5b819c9a19a38ebdd60bcd0ea3f530bf60a688bb" |
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modified:
miniasm.xml |
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added:
test-data/mini_reads.fq.gz |
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| diff -r 8dee0218ac7d -r 73a3846701e1 miniasm.xml --- a/miniasm.xml Thu Sep 03 16:20:16 2020 +0000 +++ b/miniasm.xml Fri Apr 02 20:20:44 2021 +0000 |
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| @@ -1,4 +1,4 @@ -<tool id="miniasm" name="miniasm" version="@TOOL_VERSION@+galaxy0"> +<tool id="miniasm" name="miniasm" version="@TOOL_VERSION@+galaxy1"> <description>Ultrafast de novo assembly for long noisy reads </description> <macros> <token name="@TOOL_VERSION@">0.3</token> @@ -25,7 +25,7 @@ '$paf' > '$gfa' ]]></command> <inputs> - <param name="readFile" type="data" format="fastq,fasta" label="Sequence Reads" /> + <param name="readFile" type="data" format="fastq,fastq.gz,fasta,fasta.gz" label="Sequence Reads" /> <param name="paf" type="data" format="tabular" label="PAF file" help="Pairwise mapping format" /> <section name="preselection" title="Preselection options"> <param argument="-m" name="minMatch" type="integer" value="100" label="Drop mappings having less than this number of matching bases" @@ -65,7 +65,7 @@ <output name="gfa" file="mini_reads.gfa"/> </test> <test> - <param name="readFile" value="mini_reads.fq"/> + <param name="readFile" value="mini_reads.fq.gz"/> <param name="minMatch" value="99"/> <param name="minIden" value="0.04"/> <param name="minSpan" value="999"/> |
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| diff -r 8dee0218ac7d -r 73a3846701e1 test-data/mini_reads.fq.gz |
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| Binary file test-data/mini_reads.fq.gz has changed |