| Previous changeset 1:8097f9124f87 (2024-02-28) Next changeset 3:80102785f5ff (2024-05-30) |
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Commit message:
planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/vitessce commit a6714d257c45c11d999c7cc2241c89da193cae15 |
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modified:
main_macros.xml |
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| diff -r 8097f9124f87 -r 764f6363e2a9 main_macros.xml --- a/main_macros.xml Wed Feb 28 20:53:12 2024 +0000 +++ b/main_macros.xml Fri May 10 17:21:02 2024 +0000 |
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| @@ -1,11 +1,11 @@ <macros> <token name="@TOOL_VERSION@">1.0.4</token> - <token name="@VERSION_SUFFIX@">3</token> + <token name="@VERSION_SUFFIX@">4</token> <token name="@PROFILE@">20.01</token> <xml name="vitessce_requirements"> <requirements> - <container type="docker">quay.io/goeckslab/vitessce:@TOOL_VERSION@</container> + <container type="docker">quay.io/goeckslab/vitessce:@TOOL_VERSION@v2</container> </requirements> </xml> @@ -18,7 +18,8 @@ <xml name="vitessce_cmd" token_tool_id="vitessce_spatial"> <command detect_errors="aggressive"> <![CDATA[ - export BF_MAX_MEM="\${GALAXY_MEMORY_MB}m" && + MAX_MEM=\${GALAXY_MEMORY_MB:-2000} && + export BF_MAX_MEM="\$((\$MAX_MEM/2))m" && mkdir -p '${output.files_path}/A/0' && ln -sf '$image' '${output.files_path}/A/0/image01.ome.tiff' && #if $masks |