Repository 'monarchinitiative'
hg clone https://toolshed.g2.bx.psu.edu/repos/nathandunn/monarchinitiative

Changeset 1:7ae426ca9054 (2016-06-26)
Previous changeset 0:850bb90bd667 (2016-06-26) Next changeset 2:3107c58d5c85 (2016-06-27)
Commit message:
planemo upload commit b538202f822ef9ce7af7f1ff2867dd1455b83725
modified:
README.rst
monarch-genes-for-diseases.xml
monarch-genes-for-phenotypes.xml
monarch-homologues.xml
monarch-phenopackets.xml
monarch-phenotypes-for-disease.xml
monarch-variants-for-diseases.xml
monarch-variants-for-phenotypes.xml
b
diff -r 850bb90bd667 -r 7ae426ca9054 README.rst
--- a/README.rst Sun Jun 26 16:00:28 2016 -0400
+++ b/README.rst Sun Jun 26 16:24:15 2016 -0400
[
@@ -2,6 +2,8 @@
 
 This project wraps the Gene Ontology SOLR services (GOLR) exposed by the [Monarch initiative](https://monarchinitiative.org). 
 
+[![DOI](https://zenodo.org/badge/doi/10.5281/zenodo.56412.svg)](http://dx.doi.org/10.5281/zenodo.56412)
+
 # Gene Ontology Curl
 
     planemo serve
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-genes-for-diseases.xml
--- a/monarch-genes-for-diseases.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-genes-for-diseases.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -62,6 +62,6 @@
  subject,subject_label,subject_taxon,subject_taxon_label,relation,relation_label,object,object_label,evidence,evidence_label,source,is_defined_by,qualifier
     ]]></help>
  <citations>
- <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+ <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-genes-for-phenotypes.xml
--- a/monarch-genes-for-phenotypes.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-genes-for-phenotypes.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -52,6 +52,6 @@
  subject,subject_label,subject_taxon,subject_taxon_label,relation,relation_label,object,object_label,evidence,evidence_label,source,is_defined_by,qualifier
     ]]></help>
  <citations>
- <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+ <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-homologues.xml
--- a/monarch-homologues.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-homologues.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -52,6 +52,6 @@
  object,object_label,object_taxon,object_taxon_label,relation,relation_label,evidence,evidence_label,source,is_defined_by,qualifier
     ]]></help>
  <citations>
- <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+ <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-phenopackets.xml
--- a/monarch-phenopackets.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-phenopackets.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -67,6 +67,6 @@
  https://github.com/phenopackets/phenopacket-format/wiki/Getting-Started
     ]]></help>
     <citations>
-        <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+        <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-phenotypes-for-disease.xml
--- a/monarch-phenotypes-for-disease.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-phenotypes-for-disease.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -52,6 +52,6 @@
  subject,subject_label,relation,relation_label,object,object_label,evidence,evidence_label,source,is_defined_by,qualifier
     ]]></help>
  <citations>
- <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+ <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-variants-for-diseases.xml
--- a/monarch-variants-for-diseases.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-variants-for-diseases.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -52,6 +52,6 @@
  subject,subject_label,subject_taxon,subject_taxon_label,subject_gene,subject_gene_label,relation,relation_label,object,object_label,evidence,evidence_label,source,is_defined_by,qualifier
     ]]></help>
  <citations>
- <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+ <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>
b
diff -r 850bb90bd667 -r 7ae426ca9054 monarch-variants-for-phenotypes.xml
--- a/monarch-variants-for-phenotypes.xml Sun Jun 26 16:00:28 2016 -0400
+++ b/monarch-variants-for-phenotypes.xml Sun Jun 26 16:24:15 2016 -0400
b
@@ -53,6 +53,6 @@
  subject subject_label relation relation_label object object_label evidence evidence_label source is_defined_by qualifier
     ]]></help>
  <citations>
- <citation type="doi">doi:10.1038/nprot.2015.124</citation>
+ <citation type="doi">doi:10.5281/zenodo.56412</citation>
     </citations>
 </tool>