| Previous changeset 51:6ee949c61f20 (2017-04-24) Next changeset 53:46acdba0f6d8 (2017-04-24) |
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modified:
GRsetFromGEO/GRsetFromGEO.R GRsetFromGEO/GRsetFromGEO.xml |
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| diff -r 6ee949c61f20 -r 7aeee7c02c4d GRsetFromGEO/GRsetFromGEO.R --- a/GRsetFromGEO/GRsetFromGEO.R Mon Apr 24 12:04:10 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.R Mon Apr 24 12:19:55 2017 -0400 |
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| @@ -1,3 +1,4 @@ +require("BiocGenerics", quietly = TRUE) require("GEOquery", quietly = TRUE) require("minfi", quietly = TRUE) require("FDb.InfiniumMethylation.hg19", quietly = TRUE) |
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| diff -r 6ee949c61f20 -r 7aeee7c02c4d GRsetFromGEO/GRsetFromGEO.xml --- a/GRsetFromGEO/GRsetFromGEO.xml Mon Apr 24 12:04:10 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.xml Mon Apr 24 12:19:55 2017 -0400 |
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| @@ -13,7 +13,7 @@ <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> </inputs> <outputs> - <data format="rdata" name="output" label="GRsetFromGEO.rdata"/> + <data format="RDdata" name="output" label="GRsetFromGEO.RData"/> </outputs> <tests> <test> @@ -24,7 +24,7 @@ </collection> </element> </param> - <output format="rdata" name="output" label="test-data/out.Rdata"/> + <output type="data" format="RData" name="output" label="test-data/out.RData"/> </test> </tests> <help> |