Repository 'pirna_pipeline'
hg clone https://toolshed.g2.bx.psu.edu/repos/romaingred/pirna_pipeline

Changeset 23:7dd78ad2875f (2017-10-20)
Previous changeset 22:b9cf69322742 (2017-10-20) Next changeset 24:08bbde9d0c9d (2017-10-23)
Commit message:
Uploaded
modified:
bin/piPipe.pl
b
diff -r b9cf69322742 -r 7dd78ad2875f bin/piPipe.pl
--- a/bin/piPipe.pl Fri Oct 20 08:35:06 2017 -0400
+++ b/bin/piPipe.pl Fri Oct 20 09:33:54 2017 -0400
[
@@ -260,7 +260,7 @@
  #HTML Menu
  my $menu_page = $dir.$fastq_n[$child].'-sub.html';
  menu_page ( $group_dir, $menu_page, \@fastq_n, $fastq_n[$child], $min, $max, $si_min, $si_max, $pi_min, $pi_max, $dir );
-
+ unlink glob "$group_dir*.sam"; unlink glob "$group_dir*.fastq";
  $pm->finish(); # pass an exit code to finish
 }
 $pm->wait_all_children;