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tool_dependencies.xml |
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diff -r 000000000000 -r 7f2795b29d61 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu May 12 06:48:30 2016 -0400 |
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@@ -0,0 +1,20 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="subread" version="1.5.0-p1"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://sourceforge.net/projects/subread/files/subread-1.5.0-p1/subread-1.5.0-p1-source.tar.gz/download</action> + <action type="shell_command">cd src && make -f Makefile.Linux</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + <action type="set_environment"> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> + <environment_variable action="set_to" name="SUBREAD_ROOT">$INSTALL_DIR</environment_variable> + </action> + </actions> + </install> + <readme /> + </package> +</tool_dependency> |