| Previous changeset 7:3d5bd42097d7 (2022-11-15) |
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Commit message:
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sr_bowtie commit 269546398f6e244a5df4aa2108bb4705fad15f7a |
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modified:
sRbowtie.xml |
| b |
| diff -r 3d5bd42097d7 -r 8157d59a8190 sRbowtie.xml --- a/sRbowtie.xml Tue Nov 15 00:44:57 2022 +0000 +++ b/sRbowtie.xml Thu Nov 07 15:58:27 2024 +0000 |
| b |
| @@ -1,5 +1,8 @@ -<tool id="bowtieForSmallRNA" name="sR_bowtie" version="2.3.0"> +<tool id="bowtieForSmallRNA" name="sR_bowtie" version="2.3.1"> <description>for small RNA short reads</description> + <xrefs> + <xref type="bio.tools">sr_bowtie</xref> + </xrefs> <requirements> <requirement type="package" version="1.3.1">bowtie</requirement> <requirement type="package" version="1.14">samtools</requirement> @@ -132,7 +135,7 @@ </data> </outputs> <tests> - <test> + <test expect_num_outputs="1"> <param name="genomeSource" value="history" /> <param ftype="fasta" name="ownFile" value="297_reference.fa" /> <param name="method" value="unique" /> @@ -141,7 +144,7 @@ <param name="output_format" value="bam" /> <output file="output.bam" ftype="bam" compare="sim_size" delta="1000" name="output" /> </test> - <test> + <test expect_num_outputs="1"> <param name="genomeSource" value="history" /> <param ftype="fasta" name="ownFile" value="297_reference.fa" /> <param name="method" value="unique" /> @@ -150,7 +153,7 @@ <param name="output_format" value="bam" /> <output file="output2.bam" ftype="bam" compare="sim_size" delta="1000" name="output" /> </test> - <test> + <test expect_num_outputs="2"> <param name="genomeSource" value="history" /> <param ftype="fasta" name="ownFile" value="297_reference.fa" /> <param name="method" value="unique" /> @@ -161,7 +164,7 @@ <output file="output2.bam" ftype="bam" compare="sim_size" delta="1000" name="output" /> <output file="al.fastqsanger" ftype="fastqsanger" name="aligned" /> </test> - <test> + <test expect_num_outputs="1"> <param name="genomeSource" value="history" /> <param ftype="fasta" name="ownFile" value="297_reference.fa" /> <param name="method" value="multiple" /> @@ -170,7 +173,7 @@ <param name="output_format" value="tabular" /> <output file="output.tab" ftype="tabular" name="output" /> </test> - <test> + <test expect_num_outputs="2"> <param name="genomeSource" value="history" /> <param ftype="fasta" name="ownFile" value="297_reference.fa" /> <param name="method" value="multiple" /> |