Previous changeset 4:04f5c3d7448e (2018-05-04) Next changeset 6:65ab76d58c41 (2018-12-18) |
Commit message:
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 9c21a3564ebac92db23e2d827dabe6b05c56ad32 |
modified:
repeatmasker.xml |
b |
diff -r 04f5c3d7448e -r 8404aa79a631 repeatmasker.xml --- a/repeatmasker.xml Fri May 04 07:59:50 2018 -0400 +++ b/repeatmasker.xml Wed May 23 14:24:14 2018 -0400 |
[ |
@@ -66,7 +66,11 @@ sed -r 's/^ *// ; s/ *$//; s/\+ //; s/ +/\t/g' rm_input.fasta.polyout >'${output_polymorphic}' && #end if #end if - mv rm_input.fasta.cat '${output_repeat_catalog}' + if [ -f 'rm_input.fasta.cat.gz' ]; then + zcat 'rm_input.fasta.cat.gz' > '${output_repeat_catalog}'; + else + mv rm_input.fasta.cat '${output_repeat_catalog}'; + fi ]]> </command> |