| Previous changeset 2:08d08d22d92b (2023-06-08) Next changeset 4:4a4e207de234 (2024-06-03) |
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Commit message:
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__quality_control commit 389df0134cd0763dcf02aac6e623fc15f8861c1e |
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modified:
qiime2__quality_control__filter_reads.xml |
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| diff -r 08d08d22d92b -r 8620c7cb2e31 qiime2__quality_control__filter_reads.xml --- a/qiime2__quality_control__filter_reads.xml Thu Jun 08 19:50:32 2023 +0000 +++ b/qiime2__quality_control__filter_reads.xml Thu Apr 25 21:18:57 2024 +0000 |
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| @@ -1,24 +1,24 @@ <?xml version='1.0' encoding='utf-8'?> <!-- -Copyright (c) 2023, QIIME 2 development team. +Copyright (c) 2024, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: - q2galaxy (version: 2023.5.0) + q2galaxy (version: 2024.2.1) for: - qiime2 (version: 2023.5.1) + qiime2 (version: 2024.2.0) --> -<tool name="qiime2 quality-control filter-reads" id="qiime2__quality_control__filter_reads" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 quality-control filter-reads" id="qiime2__quality_control__filter_reads" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause"> <description>Filter demultiplexed sequences by alignment to reference database.</description> <requirements> - <container type="docker">quay.io/qiime2/core:2023.5</container> + <container type="docker">quay.io/qiime2/amplicon:2024.2</container> </requirements> <version_command>q2galaxy version quality_control</version_command> <command detect_errors="exit_code">q2galaxy run quality_control filter_reads '$inputs'</command> <configfiles> - <inputs name="inputs" data_style="paths"/> + <inputs name="inputs" data_style="staging_path_and_source_path"/> </configfiles> <inputs> <param name="demultiplexed_sequences" type="data" format="qza" label="demultiplexed_sequences: SampleData[SequencesWithQuality¹ | PairedEndSequencesWithQuality²]" help="[required] The sequences to be trimmed."> @@ -35,7 +35,6 @@ <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['Bowtie2Index']</validator> </param> <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options"> - <param name="n_threads" type="integer" min="1" value="1" label="n_threads: Int % Range(1, None)" help="[default: 1] Number of alignment threads to launch."/> <param name="mode" type="select" label="mode: Str % Choices('local', 'global')" display="radio"> <option value="local" selected="true">local</option> <option value="global">global</option> |