Repository 'tpp_prophets'
hg clone https://toolshed.g2.bx.psu.edu/repos/iracooke/tpp_prophets

Changeset 17:868e75fc0f70 (2015-10-26)
Previous changeset 16:1b86e378de37 (2015-10-26)
Commit message:
Export XML_ONLY variable
modified:
peptide_prophet.xml
b
diff -r 1b86e378de37 -r 868e75fc0f70 peptide_prophet.xml
--- a/peptide_prophet.xml Mon Oct 26 20:40:34 2015 -0400
+++ b/peptide_prophet.xml Mon Oct 26 22:04:43 2015 -0400
b
@@ -6,10 +6,7 @@
         <requirement type="package" version="4.8.0">trans_proteomic_pipeline</requirement>
     </requirements>
     <command>
-        # This should be in the tpp_package.
-        # A hack for now
-            export XML_ONLY="true";
-
+        export XML_ONLY="true";
         peptide_prophet.rb
             --galaxy $input_file
             -o peptide_prophet_output.pep.xml