| Previous changeset 0:5e3543b1ef9f (2017-01-12) Next changeset 2:382a4c19007f (2017-10-20) |
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Commit message:
planemo upload commit c8dc021bd99764eacaa17cbe4f44bcdacca00414 |
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modified:
busco.xml |
| b |
| diff -r 5e3543b1ef9f -r 87983967544b busco.xml --- a/busco.xml Thu Jan 12 15:12:47 2017 -0500 +++ b/busco.xml Tue Jan 24 12:08:38 2017 -0500 |
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| @@ -15,7 +15,9 @@ --evalue ${adv.evalue} ${adv.long} --limit ${adv.limit} - --species ${adv.species} + #if $adv.species: + --species '${adv.species}' + #end if --tarzip ]]></command> @@ -39,7 +41,7 @@ <section name="adv" title="Advanced Options" expanded="False"> <param argument="--evalue" type="float" value="0.01" label="E-value cutoff for BLAST searches."/> <param argument="--limit" type="integer" value="3" label="How many candidate regions to consider"/> - <param argument="--species" type="text" value="generic" label="Name of existing Augustus species gene finding metaparameters"/> + <param argument="--species" type="text" optional="True" label="Name of existing Augustus species gene finding metaparameters"/> <param argument="--long" type="boolean" checked="false" truevalue="--long" falsevalue="" label="Optimization mode Augustus self-training" help="Adds considerably to run time, but can improve results for some non-model organisms"/> </section> </inputs> |