Repository 'checkv_build_database'
hg clone https://toolshed.g2.bx.psu.edu/repos/ufz/checkv_build_database

Changeset 2:88042a5ead89 (2024-11-18)
Previous changeset 1:3756ac7a625b (2024-09-20) Next changeset 3:7e80c69020f7 (2024-12-18)
Commit message:
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit c78bd5eafa3d9450305cc8b32ba9cf8c64c42ba7
modified:
data_manager/checkv_datamanager.xml
b
diff -r 3756ac7a625b -r 88042a5ead89 data_manager/checkv_datamanager.xml
--- a/data_manager/checkv_datamanager.xml Fri Sep 20 09:44:08 2024 +0000
+++ b/data_manager/checkv_datamanager.xml Mon Nov 18 15:26:03 2024 +0000
b
@@ -2,7 +2,7 @@
     <description>database builder</description>
     <macros>
         <token name="@TOOL_VERSION@">1.0.3</token>
-        <token name="@VERSION_SUFFIX@">1</token>
+        <token name="@VERSION_SUFFIX@">2</token>
         <token name="@PROFILE@">22.01</token>
     </macros>
     <requirements>
@@ -16,7 +16,8 @@
         cd checkv-db-v${version}/genome_db/ &&
         diamond makedb --in checkv_reps.faa --db checkv_reps &&
         cd - &&
-        mv checkv-db-v${version} checkv-db &&
+        mkdir -p '$out_file.extra_files_path' &&
+        mv checkv-db-v${version} '$out_file.extra_files_path'/checkv-db &&
         cp '$dmjson' '$out_file'
     ]]></command>
     <configfiles>