Repository 'bwa_mem2'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bwa_mem2

Changeset 1:88bcfaea2fb6 (2021-10-16)
Previous changeset 0:82217dccdbcf (2021-10-08) Next changeset 2:b4a22d90cce9 (2021-11-24)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bwa_mem2 commit f3dfef5e47d50e07268731e372505643048116a9"
modified:
macros.xml
tool_data_table_conf.xml.sample
b
diff -r 82217dccdbcf -r 88bcfaea2fb6 macros.xml
--- a/macros.xml Fri Oct 08 10:19:48 2021 +0000
+++ b/macros.xml Sat Oct 16 08:33:03 2021 +0000
b
@@ -78,7 +78,7 @@
 
     <macro name="dbKeyActionsBwaMem">
         <expand macro="dbKeyActions">
-            <option type="from_data_table" name="bwa_mem_indexes" column="1" offset="0">
+            <option type="from_data_table" name="bwa_mem2_indexes" column="1" offset="0">
                 <filter type="param_value" column="0" value="#" compare="startswith" keep="False"/>
                 <filter type="param_value" ref="reference_source.ref_file" column="0"/>
             </option>
b
diff -r 82217dccdbcf -r 88bcfaea2fb6 tool_data_table_conf.xml.sample
--- a/tool_data_table_conf.xml.sample Fri Oct 08 10:19:48 2021 +0000
+++ b/tool_data_table_conf.xml.sample Sat Oct 16 08:33:03 2021 +0000
b
@@ -3,6 +3,6 @@
     <!-- Locations of indexes in the BWA-MEM2 mapper format-->
     <table name="bwa_mem2_indexes" comment_char="#">
         <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/bwa_mem_index.loc" />
+        <file path="tool-data/bwa_mem2_index.loc" />
     </table>
 </tables>