| Previous changeset 3:359232b58f6a (2021-11-21) Next changeset 5:169849dfb098 (2022-02-17) |
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Commit message:
"Fix number of allowed different lines in `galaxy/gecco.xml` tests" |
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modified:
gecco.xml test-data/BGC0001866.1_cluster_1.gbk test-data/sideload.json |
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| diff -r 359232b58f6a -r 88dc16b4f583 gecco.xml --- a/gecco.xml Sun Nov 21 19:47:22 2021 +0000 +++ b/gecco.xml Sat Dec 11 23:31:48 2021 +0000 |
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| @@ -62,7 +62,7 @@ <output name="features" file="features.tsv"/> <output name="clusters" file="clusters.tsv"/> <output_collection name="records" type="list"> - <element name="BGC0001866.1_cluster_1" file="BGC0001866.1_cluster_1.gbk" ftype="genbank" lines_diff="2"/> + <element name="BGC0001866.1_cluster_1" file="BGC0001866.1_cluster_1.gbk" ftype="genbank" compare="diff" lines_diff="4"/> </output_collection> </test> <test> @@ -72,7 +72,7 @@ <output name="clusters" file="clusters.tsv"/> <output name="sideload" file="sideload.json"/> <output_collection name="records" type="list"> - <element name="BGC0001866.1_cluster_1" file="BGC0001866.1_cluster_1.gbk" ftype="genbank" lines_diff="2"/> + <element name="BGC0001866.1_cluster_1" file="BGC0001866.1_cluster_1.gbk" ftype="genbank" compare="diff" lines_diff="4"/> </output_collection> </test> </tests> |
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| diff -r 359232b58f6a -r 88dc16b4f583 test-data/BGC0001866.1_cluster_1.gbk --- a/test-data/BGC0001866.1_cluster_1.gbk Sun Nov 21 19:47:22 2021 +0000 +++ b/test-data/BGC0001866.1_cluster_1.gbk Sat Dec 11 23:31:48 2021 +0000 |
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| @@ -15,7 +15,7 @@ JOURNAL bioRxiv (2021.05.03.442509) REMARK doi:10.1101/2021.05.03.442509 COMMENT ##GECCO-Data-START## - version :: GECCO v0.8.4 + version :: GECCO v0.8.5 creation_date :: 2021-11-21T16:33:58.470847 biosyn_class :: Polyketide alkaloid_probability :: 0.0 |
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| diff -r 359232b58f6a -r 88dc16b4f583 test-data/sideload.json --- a/test-data/sideload.json Sun Nov 21 19:47:22 2021 +0000 +++ b/test-data/sideload.json Sat Dec 11 23:31:48 2021 +0000 |
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| @@ -31,6 +31,6 @@ }, "description": "Biosynthetic Gene Cluster prediction with Conditional Random Fields.", "name": "GECCO", - "version": "0.8.4" + "version": "0.8.5" } } \ No newline at end of file |