Repository 'naive_variant_caller'
hg clone https://toolshed.g2.bx.psu.edu/repos/blankenberg/naive_variant_caller

Changeset 11:8af4e7a4d041 (2015-09-17)
Previous changeset 10:907b40517289 (2015-03-31) Next changeset 12:ac0235d2d459 (2015-09-17)
Commit message:
Add upgrade recommended message.
modified:
tools/naive_variant_caller.xml
b
diff -r 907b40517289 -r 8af4e7a4d041 tools/naive_variant_caller.xml
--- a/tools/naive_variant_caller.xml Tue Mar 31 11:19:47 2015 -0400
+++ b/tools/naive_variant_caller.xml Thu Sep 17 14:22:52 2015 -0400
b
@@ -122,6 +122,12 @@
     <data format="vcf" name="output_vcf" />
   </outputs>
   <help>
+.. class:: warningmark
+
+Upgrading to version 0.0.2 is recommended.
+
+------
+
 **What it does**
 
 This tool is a naive variant caller that processes aligned sequencing reads from the BAM format and produces a VCF file containing per position variant calls. This tool allows multiple BAM files to be provided as input and utilizes read group information to make calls for individual samples.