| Next changeset 1:6e49aa2461bd (2013-03-28) |
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Commit message:
Uploaded |
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added:
Galaxy-Workflow-MMuFF_v1.2.ga |
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| diff -r 000000000000 -r 8b008a3c3ccb Galaxy-Workflow-MMuFF_v1.2.ga --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Galaxy-Workflow-MMuFF_v1.2.ga Tue Mar 12 14:59:40 2013 -0400 |
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| b'@@ -0,0 +1,963 @@\n+{\n+ "a_galaxy_workflow": "true", \n+ "annotation": "", \n+ "format-version": "0.1", \n+ "name": "MMuFF_v1.2", \n+ "steps": {\n+ "0": {\n+ "annotation": "", \n+ "id": 0, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "", \n+ "name": "Forward reads fastq"\n+ }\n+ ], \n+ "name": "Input dataset", \n+ "outputs": [], \n+ "position": {\n+ "left": 244, \n+ "top": 313\n+ }, \n+ "tool_errors": null, \n+ "tool_id": null, \n+ "tool_state": "{\\"name\\": \\"Forward reads fastq\\"}", \n+ "tool_version": null, \n+ "type": "data_input", \n+ "user_outputs": []\n+ }, \n+ "1": {\n+ "annotation": "", \n+ "id": 1, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "", \n+ "name": "Reverse reads fastq"\n+ }\n+ ], \n+ "name": "Input dataset", \n+ "outputs": [], \n+ "position": {\n+ "left": 242, \n+ "top": 410\n+ }, \n+ "tool_errors": null, \n+ "tool_id": null, \n+ "tool_state": "{\\"name\\": \\"Reverse reads fastq\\"}", \n+ "tool_version": null, \n+ "type": "data_input", \n+ "user_outputs": []\n+ }, \n+ "2": {\n+ "annotation": "dbSNP.vcf", \n+ "id": 2, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "dbSNP.vcf", \n+ "name": "VCF file of known variants (dbSNP)"\n+ }\n+ ], \n+ "name": "Input dataset", \n+ "outputs": [], \n+ "position": {\n+ "left": 4063, \n+ "top": 532\n+ }, \n+ "tool_errors": null, \n+ "tool_id": null, \n+ "tool_state": "{\\"name\\": \\"VCF file of known variants (dbSNP)\\"}", \n+ "tool_version": null, \n+ "type": "data_input", \n+ "user_outputs": []\n+ }, \n+ "3": {\n+ "annotation": "These are locations other than those in dbSNP. The ID will be used to annotate the Variants dataset, and then can be filtered out. There needs to be at least one entry for each chromosome: (M,1,2,...,X,Y) even if it is a bogus value at position 1", \n+ "id": 3, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "These are locations other than those in dbSNP. The ID will be used to annotate the Variants dataset, and then can be filtered out. 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