| Previous changeset 0:39c07d717634 (2015-05-14) Next changeset 2:30bd7eaeddbf (2015-11-06) |
|
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty |
|
modified:
tool_dependencies.xml |
| b |
| diff -r 39c07d717634 -r 8b300d21e6bd tool_dependencies.xml --- a/tool_dependencies.xml Thu May 14 09:37:12 2015 -0400 +++ b/tool_dependencies.xml Fri Jul 17 10:11:42 2015 -0400 |
| b |
| @@ -10,6 +10,34 @@ <destination_directory>$INSTALL_DIR</destination_directory> </action> </actions> + <actions> + <action type="download_by_url">http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.5/bowtie2-2.2.5-source.zip</action> + <action type="shell_command">make</action> + <action type="move_file"> + <source>bowtie2</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + <action type="move_file"> + <source>bowtie2-build</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + <action type="move_file"> + <source>bowtie2-inspect</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + <action type="move_file"> + <source>bowtie</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + <action type="move_file"> + <source>bowtie-build</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + <action type="move_file"> + <source>bowtie-inspect</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + </actions> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> </action> |