| Previous changeset 1:62f7b9c20c9b (2014-04-14) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/compute_q_values commit a1517c9d22029095120643bbe2c8fa53754dd2b7 |
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modified:
compute_q_values.xml tool_dependencies.xml |
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| diff -r 62f7b9c20c9b -r 8b3593b7e5ec compute_q_values.xml --- a/compute_q_values.xml Mon Apr 14 09:11:14 2014 -0400 +++ b/compute_q_values.xml Wed Nov 11 12:08:06 2015 -0500 |
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| @@ -11,14 +11,14 @@ <inputs> <param format="tabular" name="inputFile1" type="data" label="Select the p-values file"/> - <param type="text" name="inputLambda2" size="100" value="sequence_from_0_to_0.95_increment_0.05" label="What is the lambda value?" help="Either choose the default sequence or one deciaml value between 0 and 1"/> + <param type="text" name="inputLambda2" value="sequence_from_0_to_0.95_increment_0.05" label="What is the lambda value?" help="Either choose the default sequence or one deciaml value between 0 and 1"/> <param name="inputPI0_method3" type="select" label="Choose the PI method:"> <option value="smoother">smoother</option> <option value="bootstrap">bootstrap</option> </param> - <param type="float" name="inputFDR_level4" size="5" value="" label="What is the FDR level?" help="The FDR level must be between 0 and 1"/> + <param type="float" name="inputFDR_level4" value="" label="What is the FDR level?" help="The FDR level must be between 0 and 1"/> <param name="inputRobust5" type="select" label="Do you want to make the estimate more robust:" help="Choose TRUE for small p-values"> <option value="FALSE">FALSE</option> |
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| diff -r 62f7b9c20c9b -r 8b3593b7e5ec tool_dependencies.xml --- a/tool_dependencies.xml Mon Apr 14 09:11:14 2014 -0400 +++ b/tool_dependencies.xml Wed Nov 11 12:08:06 2015 -0500 |
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| @@ -1,9 +1,9 @@ <?xml version="1.0"?> <tool_dependency> <package name="R" version="2.11.0"> - <repository changeset_revision="6e1b17857732" name="package_r_2_11_0" owner="devteam" prior_installation_required="False" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="5824d2b3bc8b" name="package_r_2_11_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="bioc_qvalue" version="1.34.0"> - <repository changeset_revision="11735242a19e" name="package_bioc_qvalue_1_34_0" owner="devteam" prior_installation_required="False" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="11735242a19e" name="package_bioc_qvalue_1_34_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency> |