| Previous changeset 19:5244d3a1a441 (2017-06-01) Next changeset 21:fe6b9d937382 (2017-06-02) |
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Commit message:
Uploaded 20170602 |
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modified:
gdcwebapp.xml json_data_source_mod.py |
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added:
._gdcwebapp.xml ._json_data_source_mod.py |
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| diff -r 5244d3a1a441 -r 8c0633c02758 ._gdcwebapp.xml |
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| Binary file ._gdcwebapp.xml has changed |
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| diff -r 5244d3a1a441 -r 8c0633c02758 ._json_data_source_mod.py |
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| Binary file ._json_data_source_mod.py has changed |
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| diff -r 5244d3a1a441 -r 8c0633c02758 gdcwebapp.xml --- a/gdcwebapp.xml Thu Jun 01 17:45:04 2017 -0400 +++ b/gdcwebapp.xml Fri Jun 02 17:49:36 2017 -0400 |
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| @@ -14,11 +14,11 @@ python ${__tool_directory__}/json_data_source_mod.py "${__app__.config.output_size_limit}" --json_param_file "${output1}" --path "." --appdata "tmp" ]]> </command> - <inputs check_values="False" action="http://bioinf.iasi.cnr.it/gdcwebapp/app.php" > + <inputs check_values="False" action="http://bioinf.iasi.cnr.it/gdcwebapp/app.php"> <display>Go to GDCWebApp service $GALAXY_URL</display> </inputs> <outputs> - <data name="output1" format="auto" label="${tool.name} Output Data" hidden="True" /> + <data name="output1" format="auto" label="${tool.name} Output Data" /> <collection name="list_output" type="list:list" label="${tool.name} Output Collection"> <discover_datasets pattern="(?P<identifier_0>[^_]+)_(?P<identifier_1>[^_]+)_(?P<ext>[^_]+)_(?P<dbkey>[^_]+)" ext="auto" visible="False" directory="tmp" /> </collection> |
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| diff -r 5244d3a1a441 -r 8c0633c02758 json_data_source_mod.py --- a/json_data_source_mod.py Thu Jun 01 17:45:04 2017 -0400 +++ b/json_data_source_mod.py Fri Jun 02 17:49:36 2017 -0400 |
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| @@ -226,8 +226,8 @@ # TODO: make sure response is not enormous query_params = json.loads(urllib.urlopen( dataset_url ).read()) # download and write files - #primary = False - primary = True + primary = False + #primary = True # query_item, hda_id, output_base_path, dataset_id for query_item in query_params: if isinstance( query_item, list ): |