Repository 'vapper'
hg clone https://toolshed.g2.bx.psu.edu/repos/johnheap/vapper

Changeset 13:8c210b4ad003 (2019-06-03)
Previous changeset 12:491102c84b20 (2019-06-03) Next changeset 14:7d1f86b4718d (2019-06-03)
Commit message:
Uploaded
modified:
data/vivax/Database/Phylotype_typeseqs.fas
b
diff -r 491102c84b20 -r 8c210b4ad003 data/vivax/Database/Phylotype_typeseqs.fas
--- a/data/vivax/Database/Phylotype_typeseqs.fas Mon Jun 03 14:14:20 2019 -0400
+++ b/data/vivax/Database/Phylotype_typeseqs.fas Mon Jun 03 14:29:04 2019 -0400
b
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LVEEQTKAATCAAREAAAKATECSIRAGTLAGNIDGMIALL\r\n+ATWYGGKSSATQNALCIQKTPNAVQTWIARLNAGSRRNAKGDLAGCFEQQNGGTERGAHA\r\n+SAVNAQAENVTHVVTDICDNKQVTQGGIQDEICPLFSARRTGGGSAVLWNGKQNGPYAKI\r\n+GGLWAVQGGETITQIRLDEREPKDEEHEEVNDDDAKNMTNAADHPRIKKIVGLAREAEAK\r\n+ITEANNATAQAQTILAKKVALTLEGKKHA\r\n+>P90_F24_TvLins_127955\r\n+VADKLEELKELAQNATARARTAANALTSIKHIAQHATEQVEVEDNTSNDEQETSVQGSSA\r\n+QKDERTQSAPDNGRKQCEQSGGTWHAQRKVCSTVQKQEADATRAPAQGNYATNPRTSQHL\r\n+RAAATLAMWTRSQQHGEHRAPLYRTHSGTNTACHARHAKQVRQTNTPAHDTGDTRFAQPH\r\n+TLRTAAQKRKNKNKRHKHSICTQPTTSTPRK\r\n+>P91_F24_G1365_Tv596_219744\r\n+VGATRGHHAAAVAVSFLLATILRGGRAADPSKGETARDFAAACRLYMDATGAAGQAKRMA\r\n+AQVKEASGREEELAQEIRQLVSGMEGASKAVAAALAAPALAHDQVGNTGGRRTAMTNTAE\r\n+DLVGKIDVAAQKAMTSGINLTAETKDEEVTKRLGSSNKNTDAFAPNGTTSEGEDLAHMLI\r\n+MLCNHGTGDNACGGTRGDKCPCV\r\n+>P93_F24_Tv306_141233\r\n+ARVTRDLEELKEAALLGSRGRAMAGDQDGACTPTSRRAVRTVSDILCAAKAQLEQAGKDI\r\n+EGAEGEAAKAVFGANAEWSDMSDDTRQQALLKDLISPAGSNANVGFSADKKSGQALASDM\r\n+LWLCNAADGSGGSNKCG\r\n+>P94_F24_G1695_Tv11_154715\r\n+LCNDHTGGTSKGCGSTAGTDCPCAPTKWVVKNGAATKPTELQTGTNCNALKASSGDANTA\r\n+SRVKQNWDTAKKICETATHAPQQTDEVSSQQKHATTQLATRIMREENIATKHATLLCLGT\r\n+SSGTGCAGASGQEACICYTGGGKAIKNVTEIPFIKAALEAAAKL\r\n+>P95_F24_G49_Tv_49033\r\n+MRALALIVALAFLHACASSAQGVATGDSKDAFGRVCDVFATLVRAAETASSLAKEERSQV\r\n+TAEEARARALAQGAGAPDSGATSCAVLPDNTTAHCEAVQLLARMDQAAADITHKVNKAIL\r\n+GDAAKSTSDLTLAAKDADTLKALLTADGQHSGNFMKADSSETNKPPKCLAQAMIFLCNNS\r\n+HSSGTDERCGKEGASRSACPCASDDAHAKLVAGSSDESIGFRSGRTTKVATAEKAWEKVR\r\n+TLCRTRPHPKHASTGPTTGHALLDALAAVEDALHAMGSTQNCLGTLGQTQCDHTNADNKQ\r\n+ACVCFGDDIKAVEWITEARAIADKLQLQTHMAQQAQWEGAQIRHEAASEARRLTLDDGTQ\r\n+QGTTEGNATSGNNSTATDKTSSASRKTASTGHGPKGTNTQSSTEPRIATGTPLANTCRDA\r\n+NQRWDPEKQQCTDNAQAAYQGLMATAAAWTLLARRLAA\r\n+>P96_F24_TvBobo14_182225\r\n+MQRLFCTCAFLLAAASVAALAADPGPGSPAAEFAVLCGDYREAKAVKDSAEQMRDGIESF\r\n+VAVGREGHVVEETGGPGSGDGIGTQPSVGSARTRSPRAIADDLAKMAESYAMQAIYGSKQ\r\n+GTGQQVPDAEAATNKLLTMLRGSTTTAKGFDEDGNDAGLILPMILLCKDGTSSSASCGTS\r\n+GGTTCPCSTAAVPASGLANTEAKY\r\n+>P97_F24_TvLins_52944\r\n+MLAAWRAVCLAALSAALAATLATGNDAGAGETVRDFGLVCNVFRNVLQARGVAKAQKARA\r\n+DEVSLEIEHAWLGEAREDLEEDVVVTTAADAKTAKAKAKKLKGQAEELADKIDGLSYSAI\r\n+LGDKGDSQPDKAENENNVLFGKIAGSGNANKGFADERSGAALSSDMMW\r\n+>P98_F25_G1634_Tv_11419\r\n+TWRGRATREQLREKATTTSSTTTPSRSQLRTDRQSAGRRTKSFASEERKPHSASMRTNVT\r\n+ALLALIDEGTRPGHYEGTAKCAPQAASAIVCDRKQWRERLRALEERVATSADGLRDLDNT\r\n+RRQTAHCRTSDTEAVPTSSMGTKQQGKTSNKHAAITGREQCTEVGHAWNFDEGRCEDPDA\r\n+NRHAPSYAQRLGSAMRSAAAAHVAIGLAKCG\r\n+>P99_F25_G984_Tv_18279\r\n+LRDERGMQSLLFGIAVAAVVVLTRQSRAATPAGLAQADGPKLCEKAFALTRLGECGLEAA\r\n+RTVEAVAKTARARSAGIEALIAAASTQGEPDDAWDAQRNALRRKAEEADSAAKELTLLAN\r\n+NATKQPMAAAGTGADLSGFLLTLAAVGTGAGPGNGRSCLKGDEHTTAGQKVRTNAHYILR\r\n+TTCGRHLGLLNEGDFATLRKAAISDVTLHDGGSGGQKSALSEKELGMSVRCSPSQRPAPQ\r\n+ARTAY\r\n+>P9_F23_G1927_Tv_54385\r\n+MLPCGLALALRSLPALASNGQGKALSEDKVADVCKLSALLKKMSLEAKKLGSVATLATGF\r\n+EASAAEEDMHVMREALGSAARLLRRRARRGADTRNETQAREMAERVVRLQEAEQTKALAA\r\n+QLAENVRQRTALTAAPIDSWIKTFAANFQGSNVACIVAQSGTGNGKAQAERFATTDTQAG\r\n+GCAATADKVATAMLPQQKMPTQDNEWQQAITAAEASKRDMLVGSESTTKCTLTASTANSY\r\n+AGAAADATQPWGFFWHITGHSTSSSVELKWSDAHQDAGTEKPKSEDALNEMWLHFKQLKE\r\n+THRQMHNACNGQAKGAPAEAPAAQKLFGDENRNMRLAIAKKVMATDASDEAHRAQRAARI\r\n+EQEARTQENANTQKDAAQGGTATQQNKQGGHRGPAPQTRTAASESAAQDSSCRQQARGAA\r\n+ATLVAFLAGARNRKHAHE\r\n+>>\r\n'