| Previous changeset 3:276f0f31ddb0 (2017-10-30) Next changeset 5:9de4252b1018 (2018-08-21) |
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Commit message:
Uploaded |
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modified:
gene_family_integrator.xml |
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| diff -r 276f0f31ddb0 -r 8ef8997aaa0c gene_family_integrator.xml --- a/gene_family_integrator.xml Mon Oct 30 09:53:09 2017 -0400 +++ b/gene_family_integrator.xml Thu Dec 21 09:15:47 2017 -0500 |
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| @@ -18,7 +18,11 @@ --orthogroup_fasta '$input_dir' --scaffold '$scaffold.fields.path' --method $method -&>proc.log +&>gene_family_integrator_log.txt; +if [[ $? -ne 0 ]]; then + cp gene_family_integrator_log.txt integratedGeneFamilies_dir; + exit 1; +fi ]]></command> <inputs> <param name="input" format="fasta" type="data_collection" collection_type="list" label="Classified orthogroup fasta files" /> |