| Previous changeset 0:57aa9597cd31 (2020-02-08) Next changeset 2:17b1cd0f4812 (2020-04-14) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/idr_download commit c496b34c7f6265cccd9326fd239542d9e625c1a4" |
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modified:
idr_download_by_ids.py idr_download_by_ids.xml |
| b |
| diff -r 57aa9597cd31 -r 9340cbc7796c idr_download_by_ids.py --- a/idr_download_by_ids.py Sat Feb 08 13:24:39 2020 -0500 +++ b/idr_download_by_ids.py Tue Mar 24 13:48:46 2020 -0400 |
| [ |
| @@ -189,7 +189,7 @@ ) # download and save the region as TIFF - fname = '_'.join( + fname = '__'.join( [image_name, str(image_id)] + [str(x) for x in tile] ) download_plane_as_tiff(image, tile, z_stack, channel_index, frame, fname) |
| b |
| diff -r 57aa9597cd31 -r 9340cbc7796c idr_download_by_ids.xml --- a/idr_download_by_ids.xml Sat Feb 08 13:24:39 2020 -0500 +++ b/idr_download_by_ids.xml Tue Mar 24 13:48:46 2020 -0400 |
| b |
| @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="idr_download_by_ids" name="IDR Download" version="0.9" profile="18.09"> +<tool id="idr_download_by_ids" name="IDR Download" version="0.10" profile="18.09"> <description>- download images from the Image Data Resource using image IDs</description> <macros> <xml name="region_spec" token_pos="upper-left corner"> @@ -107,7 +107,7 @@ </conditional> <param name="frame" value="2" /> <output_collection name="output_file" type="list"> - <element name="Centrin_PCNT_Cep215_20110506_Fri-1545_0_SIR_PRJ_1884807_3_3_5_5" file="test1.tiff"/> + <element name="Centrin_PCNT_Cep215_20110506_Fri-1545_0_SIR_PRJ__1884807__3__3__5__5" file="test1.tiff"/> </output_collection> </test> <test> @@ -123,7 +123,7 @@ </conditional> <param name="frame" value="2" /> <output_collection name="output_file" type="list"> - <element name="Centrin_PCNT_Cep215_20110506_Fri-1545_0_SIR_PRJ_1884807_3_3_5_5" file="test1.tiff"/> + <element name="Centrin_PCNT_Cep215_20110506_Fri-1545_0_SIR_PRJ__1884807__3__3__5__5" file="test1.tiff"/> </output_collection> </test> <test> @@ -139,7 +139,7 @@ </conditional> <param name="frame" value="2" /> <output_collection name="output_file" type="list"> - <element name="Centrin_PCNT_Cep215_20110506_Fri-1545_0_SIR_PRJ_1884807_3_3_5_5" file="test1.tiff"/> + <element name="Centrin_PCNT_Cep215_20110506_Fri-1545_0_SIR_PRJ__1884807__3__3__5__5" file="test1.tiff"/> </output_collection> </test> <test> @@ -152,7 +152,7 @@ </conditional> <param name="frame" value="20" /> <output_collection name="output_file" type="list" count="3"> - <element name="171101_LeadingEdgeDeletionPSMMovies01_15_R3D_9036711_0_0_1024_1024"> + <element name="171101_LeadingEdgeDeletionPSMMovies01_15_R3D__9036711__0__0__1024__1024"> <assert_contents> <has_size value="4194510" /> </assert_contents> @@ -189,7 +189,7 @@ <param name="frame" value="20" /> <param name="skip_failed" value="true" /> <output_collection name="output_file" type="list" count="2"> - <element name="171101_LeadingEdgeDeletionPSMMovies01_15_R3D_9036711_0_0_1024_1024"> + <element name="171101_LeadingEdgeDeletionPSMMovies01_15_R3D__9036711__0__0__1024__1024"> <assert_contents> <has_size value="4194510" /> </assert_contents> |