Repository 'annovar_yaml_wrapper'
hg clone https://toolshed.g2.bx.psu.edu/repos/niels/annovar_yaml_wrapper

Changeset 14:94ddfdeb1d38 (2019-05-14)
Previous changeset 13:aeb0873c9218 (2019-05-14) Next changeset 15:7f4fb56714e8 (2019-06-07)
Commit message:
Uploaded
modified:
annovar_yaml/annovar_yaml.xml
b
diff -r aeb0873c9218 -r 94ddfdeb1d38 annovar_yaml/annovar_yaml.xml
--- a/annovar_yaml/annovar_yaml.xml Tue May 14 07:19:12 2019 -0400
+++ b/annovar_yaml/annovar_yaml.xml Tue May 14 07:49:56 2019 -0400
[
@@ -1,14 +1,14 @@
-<tool id="annovar_yaml" name="Annovar YAML" version="1.0">
+<tool id="annovar_yaml" name="Annovar YAML" version="1.1">
     <requirements>
         <requirement type="package" version="5.22.0">perl</requirement>
-        <requirement type="package" version="1.27">perl-yaml</requirement>
-        <requirement type="package" version="1.73">perl-yaml-tiny</requirement>
+        <requirement type="package" version="1.24">perl-yaml</requirement>
+        <requirement type="package" version="1.70">perl-yaml-tiny</requirement>
         <requirement type="package" version="0.74">perl-yaml-xs</requirement>
-        <requirement type="package" version="2.173">perl-data-dumper</requirement>
+        <requirement type="package" version="2.161">perl-data-dumper</requirement>
         <requirement type="package" version="2.50">perl-getopt-long</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        perl --version && perl $__tool_directory__/annovar_yaml.pl --invcf $vcf --inyml $yaml --outvcf $output
+        which perl && perl $__tool_directory__/annovar_yaml.pl --invcf $vcf --inyml $yaml --outvcf $output
     ]]></command>
 
     <inputs>