Repository 'data_manager_hisat2_index_builder'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_hisat2_index_builder

Changeset 3:98a60a4cfb9a (2015-11-23)
Previous changeset 2:4014cb2c17db (2015-10-10) Next changeset 4:d210e1f185bd (2017-04-04)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat2_index_builder commit 0efd33dc98b2632dfa5b5bcef71f463951c1e38e-dirty
modified:
data_manager/hisat2_index_builder.py
b
diff -r 4014cb2c17db -r 98a60a4cfb9a data_manager/hisat2_index_builder.py
--- a/data_manager/hisat2_index_builder.py Sat Oct 10 16:23:50 2015 -0400
+++ b/data_manager/hisat2_index_builder.py Mon Nov 23 09:41:52 2015 -0500
b
@@ -62,7 +62,7 @@
     parser.add_argument( '--fasta_dbkey', dest='fasta_dbkey', action='store', type=str, default=None )
     parser.add_argument( '--fasta_description', dest='fasta_description', action='store', type=str, default=None )
     parser.add_argument( '--data_table_name', dest='data_table_name', action='store', type=str, default='hisat2_indexes' )
-    parser.add_argument( '--indexer_options', dest='indexer_options', action='store', type=str, default=None )
+    parser.add_argument( '--indexer_options', dest='indexer_options', action='store', type=str, default='' )
     options = parser.parse_args()
 
     filename = options.output