| Previous changeset 0:44bb4258922f (2015-05-19) Next changeset 2:5caf592bb259 (2015-08-10) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty |
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modified:
tool_dependencies.xml |
| b |
| diff -r 44bb4258922f -r 997181c8671c tool_dependencies.xml --- a/tool_dependencies.xml Tue May 19 15:00:33 2015 -0400 +++ b/tool_dependencies.xml Fri Jul 17 10:47:57 2015 -0400 |
| [ |
| b'@@ -3,39 +3,33 @@\n <package name="zlib" version="1.2.8">\n <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n <package name="readline" version="6.2">\n <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n <package name="bzlib" version="1.0.6">\n- <repository changeset_revision="f744bc704064" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n+ <repository changeset_revision="c494aad769a8" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n <package name="xz" version="5.0.5">\n <repository changeset_revision="0f72eb330da4" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n- <package name="openssl" version="1.0.1">\n- <repository changeset_revision="a8db64fce735" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n+ <!--\n+ <package name="openssl" version="1.0">\n+ <repository name="package_openssl_1_0" owner="iuc" prior_installation_required="True" />\n </package>\n-\n+ -->\n <package name="sqlite" version="3.8.3">\n <repository changeset_revision="706b1f3b1fc0" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n <package name="gdbm" version="1.11">\n- <repository changeset_revision="ad3c23208758" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n+ <repository changeset_revision="ed2537bccffc" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n <package name="ncurses" version="5.9">\n <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />\n </package>\n-\n <package name="python" version="2.7">\n <install version="1.0">\n <actions>\n- <action type="download_by_url">https://www.python.org/ftp/python/2.7.7/Python-2.7.7.tgz</action>\n+ <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action>\n \n <action type="set_environment_for_install">\n <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n@@ -44,48 +38,58 @@\n <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n <package name="readline" version="6.2" />\n </repository>\n- <repository changeset_revision="f744bc704064" name="package_bzlib_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n+ <repository changeset_revision="c494aad769a8" name="package_bzlib_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n <package name="bzlib" version="1.0.6" />\n </repository>\n <repository changeset_revision="0f72eb330da4" name="package_xz_5_0_5" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n <package name="xz" version="5.0.5" />\n </repository>\n- <repository changeset_revision="a8db64fce735" name="package_openssl_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n- <package name="openssl" version="1.0.1" />\n- </repository>\n <repository changeset_revision="706b1f3b1fc0" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n <p'..b's://toolshed.g2.bx.psu.edu">\n+ <!--\n+ <repository name="package_openssl_1_0" owner="iuc">\n+ <package name="openssl" version="1.0" />\n+ </repository>\n+ -->\n+ <repository changeset_revision="ed2537bccffc" name="package_gdbm_1_11" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n <package name="gdbm" version="1.11" />\n </repository>\n <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">\n <package name="ncurses" version="5.9" />\n </repository>\n </action>\n+ <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->\n+ <action type="shell_command">sed -i.bak -e "s/if host_platform == \'atheos\':/if True:/g" setup.py</action>\n \n <action type="autoconf" />\n+ <action type="download_file">https://bitbucket.org/pypa/setuptools/get/6.1.tar.bz2</action>\n+ <action type="shell_command">tar -xjf 6.1.tar.bz2</action>\n+ <action type="change_directory">pypa-setuptools-7ea80190d494</action>\n \n- <action type="download_file">https://bitbucket.org/pypa/setuptools/get/5.2.tar.bz2</action>\n- <action type="shell_command">tar -xjf 5.2.tar.bz2</action>\n- <action type="change_directory">pypa-setuptools-f493e6c4ffd8</action>\n-\n- <action type="shell_command">export PATH=$PATH:$INSTALL_DIR/bin &&\n+ <action type="shell_command">\n+ export PATH=$PATH:$INSTALL_DIR/bin &&\n export PYTHONHOME=$INSTALL_DIR &&\n export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &&\n export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python2.7/site-packages/ &&\n export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig &&\n- $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR</action>\n+ $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR\n+ </action>\n <action type="set_environment">\n- <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>\n- <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>\n- <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>\n- <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>\n+ <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>\n+ <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>\n+ <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable>\n+ <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>\n+ <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>\n+ <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>\n+ <!--\n+ <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/pkgconfig</environment_variable>\n+ <environment_variable action="prepend_to" name="LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>\n+ <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>\n+ <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable>\n+ <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable>\n+ -->\n </action>\n-\n-\n-\n-\n </actions>\n </install>\n \n' |