| Previous changeset 9:5029fd9d572e (2025-04-01) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ampvis2 commit e0ad9ce8f508215ec6af69be2682a0faf38415da |
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modified:
macros.xml test-data/output_metadata.tsv |
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| diff -r 5029fd9d572e -r 9b3e1acc3ad0 macros.xml --- a/macros.xml Tue Apr 01 10:03:02 2025 +0000 +++ b/macros.xml Mon Nov 10 13:09:07 2025 +0000 |
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| @@ -1,5 +1,5 @@ <macros> - <token name="@TOOL_VERSION@">2.8.9</token> + <token name="@TOOL_VERSION@">2.8.11</token> <token name="@VERSION_SUFFIX@">0</token> <token name="@PROFILE@">22.01</token> <xml name="header"> @@ -9,7 +9,7 @@ <requirements> <requirement type="package" version="@TOOL_VERSION@">r-ampvis2</requirement> <requirement type="package" version="2.1.5">r-readr</requirement> - <requirement type="package" version="1.46.0">bioconductor-phyloseq</requirement> + <requirement type="package" version="1.50.0">bioconductor-phyloseq</requirement> </requirements> <version_command><![CDATA[ echo $(R --version | grep "R version")", ampvis2 version" $(R --vanilla --slave -e "library(ampvis2, quietly = TRUE); sessionInfo()\$otherPkgs\$ampvis2\$Version" 2> /dev/null | grep -v -i "WARNING: ") |
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| diff -r 5029fd9d572e -r 9b3e1acc3ad0 test-data/output_metadata.tsv --- a/test-data/output_metadata.tsv Tue Apr 01 10:03:02 2025 +0000 +++ b/test-data/output_metadata.tsv Mon Nov 10 13:09:07 2025 +0000 |
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| @@ -1,68 +1,68 @@ - SampleID Plant Date Year Period -16SAMP-747 16SAMP-747 Aalborg East 2010-02-04 2010 Winter -16S-AMP-1168 16S-AMP-1168 Aalborg West 2013-05-06 2013 Spring -16SAMP-4603 16SAMP-4603 Aalborg East 2014-08-19 2014 Summer -16S-AMP-1149 16S-AMP-1149 Aalborg East 2013-10-28 2013 Fall -16SAMP-537 16SAMP-537 Aalborg West 2010-08-19 2010 Summer -16S-AMP-1114 16S-AMP-1114 Aalborg West 2013-02-04 2013 Winter -16SAMP-3893 16SAMP-3893 Aalborg East 2014-02-06 2014 Winter -16SAMP-703 16SAMP-703 Aalborg East 2006-02-04 2006 Winter -16SAMP-638 16SAMP-638 Aalborg East 2012-10-28 2012 Fall -16SAMP-2611 16SAMP-2611 Aalborg East 2011-02-04 2011 Winter -16S-AMP-1100 16S-AMP-1100 Aalborg West 2012-08-19 2012 Summer -16SAMP-608 16SAMP-608 Aalborg East 2011-10-28 2011 Fall -16SAMP-636 16SAMP-636 Aalborg East 2012-05-06 2012 Spring -16SAMP-13288 16SAMP-13288 Aalborg West 2015-02-09 2015 Winter -16SAMP-719 16SAMP-719 Aalborg East 2007-08-19 2007 Summer -16S-AMP-1098 16S-AMP-1098 Aalborg West 2012-02-04 2012 Winter -16SAMP-536 16SAMP-536 Aalborg West 2010-05-06 2010 Spring -16S-AMP-1169 16S-AMP-1169 Aalborg West 2013-08-19 2013 Summer -16SAMP-635 16SAMP-635 Aalborg East 2012-02-04 2012 Winter -16SAMP-637 16SAMP-637 Aalborg East 2012-08-19 2012 Summer -16SAMP-717 16SAMP-717 Aalborg East 2007-02-04 2007 Winter -16S-AMP-1148 16S-AMP-1148 Aalborg East 2013-08-19 2013 Summer -16SAMP-735 16SAMP-735 Aalborg West 2008-05-06 2008 Spring -16SAMP-729 16SAMP-729 Aalborg East 2008-08-19 2008 Summer -16SAMP-738 16SAMP-738 Aalborg East 2009-02-04 2009 Winter -16SAMP-2613 16SAMP-2613 Aalborg West 2011-08-19 2011 Summer -16SAMP-10925 16SAMP-10925 Aalborg East 2015-10-27 2015 Fall -16SAMP-3913 16SAMP-3913 Aalborg East 2014-07-03 2014 Summer -16SAMP-716 16SAMP-716 Aalborg West 2006-02-04 2006 Winter -16SAMP-726 16SAMP-726 Aalborg West 2007-08-19 2007 Summer -16SAMP-728 16SAMP-728 Aalborg East 2008-05-06 2008 Spring -16SAMP-625 16SAMP-625 Aalborg West 2011-02-04 2011 Winter -16SAMP-736 16SAMP-736 Aalborg West 2008-08-19 2008 Summer -16SAMP-13281 16SAMP-13281 Aalborg East 2015-02-10 2015 Winter -16SAMP-626 16SAMP-626 Aalborg West 2011-10-28 2011 Fall -16SAMP-704 16SAMP-704 Aalborg East 2006-05-06 2006 Spring -16SAMP-2612 16SAMP-2612 Aalborg East 2011-08-19 2011 Summer -16SAMP-746 16SAMP-746 Aalborg West 2009-05-06 2009 Spring -16SAMP-522 16SAMP-522 Aalborg East 2010-10-28 2010 Fall -16SAMP-516 16SAMP-516 Aalborg West 2009-10-28 2009 Fall -16S-AMP-1170 16S-AMP-1170 Aalborg West 2013-10-28 2013 Fall -16S-AMP-1099 16S-AMP-1099 Aalborg West 2012-05-06 2012 Spring -16SAMP-10932 16SAMP-10932 Aalborg West 2015-10-27 2015 Fall -16SAMP-740 16SAMP-740 Aalborg East 2009-10-28 2009 Fall -16SAMP-739 16SAMP-739 Aalborg East 2009-05-06 2009 Spring -16SAMP-4597 16SAMP-4597 Aalborg West 2014-05-05 2014 Spring -16SAMP-535 16SAMP-535 Aalborg West 2010-02-04 2010 Winter -16SAMP-3941 16SAMP-3941 Aalborg West 2014-08-18 2014 Summer -16SAMP-3953 16SAMP-3953 Aalborg West 2014-11-12 2014 Fall -16SAMP-720 16SAMP-720 Aalborg East 2007-10-28 2007 Fall -16SAMP-705 16SAMP-705 Aalborg East 2006-08-19 2006 Summer -16SAMP-10907 16SAMP-10907 Aalborg East 2015-08-24 2015 Summer -16SAMP-538 16SAMP-538 Aalborg West 2010-10-28 2010 Fall -16SAMP-10911 16SAMP-10911 Aalborg West 2015-08-24 2015 Summer -16SAMP-737 16SAMP-737 Aalborg West 2008-10-28 2008 Fall -16SAMP-4591 16SAMP-4591 Aalborg West 2014-02-04 2014 Winter -16SAMP-745 16SAMP-745 Aalborg West 2009-02-04 2009 Winter -16SAMP-706 16SAMP-706 Aalborg East 2006-10-28 2006 Fall -16SAMP-3946 16SAMP-3946 Aalborg East 2014-11-13 2014 Fall -16S-AMP-1101 16S-AMP-1101 Aalborg West 2012-10-28 2012 Fall -16SAMP-10896 16SAMP-10896 Aalborg West 2015-05-04 2015 Spring -16SAMP-10891 16SAMP-10891 Aalborg East 2015-05-04 2015 Spring -16SAMP-748 16SAMP-748 Aalborg East 2010-05-06 2010 Spring -16SAMP-725 16SAMP-725 Aalborg West 2007-02-04 2007 Winter -16SAMP-730 16SAMP-730 Aalborg East 2008-10-28 2008 Fall -16S-AMP-1107 16S-AMP-1107 Aalborg East 2013-05-06 2013 Spring -16SAMP-727 16SAMP-727 Aalborg East 2008-02-04 2008 Winter +SampleID Plant Date Year Period +16SAMP-747 Aalborg East 2010-02-04 2010 Winter +16S-AMP-1168 Aalborg West 2013-05-06 2013 Spring +16SAMP-4603 Aalborg East 2014-08-19 2014 Summer +16S-AMP-1149 Aalborg East 2013-10-28 2013 Fall +16SAMP-537 Aalborg West 2010-08-19 2010 Summer +16S-AMP-1114 Aalborg West 2013-02-04 2013 Winter +16SAMP-3893 Aalborg East 2014-02-06 2014 Winter +16SAMP-703 Aalborg East 2006-02-04 2006 Winter +16SAMP-638 Aalborg East 2012-10-28 2012 Fall +16SAMP-2611 Aalborg East 2011-02-04 2011 Winter +16S-AMP-1100 Aalborg West 2012-08-19 2012 Summer +16SAMP-608 Aalborg East 2011-10-28 2011 Fall +16SAMP-636 Aalborg East 2012-05-06 2012 Spring +16SAMP-13288 Aalborg West 2015-02-09 2015 Winter +16SAMP-719 Aalborg East 2007-08-19 2007 Summer +16S-AMP-1098 Aalborg West 2012-02-04 2012 Winter +16SAMP-536 Aalborg West 2010-05-06 2010 Spring +16S-AMP-1169 Aalborg West 2013-08-19 2013 Summer +16SAMP-635 Aalborg East 2012-02-04 2012 Winter +16SAMP-637 Aalborg East 2012-08-19 2012 Summer +16SAMP-717 Aalborg East 2007-02-04 2007 Winter +16S-AMP-1148 Aalborg East 2013-08-19 2013 Summer +16SAMP-735 Aalborg West 2008-05-06 2008 Spring +16SAMP-729 Aalborg East 2008-08-19 2008 Summer +16SAMP-738 Aalborg East 2009-02-04 2009 Winter +16SAMP-2613 Aalborg West 2011-08-19 2011 Summer +16SAMP-10925 Aalborg East 2015-10-27 2015 Fall +16SAMP-3913 Aalborg East 2014-07-03 2014 Summer +16SAMP-716 Aalborg West 2006-02-04 2006 Winter +16SAMP-726 Aalborg West 2007-08-19 2007 Summer +16SAMP-728 Aalborg East 2008-05-06 2008 Spring +16SAMP-625 Aalborg West 2011-02-04 2011 Winter +16SAMP-736 Aalborg West 2008-08-19 2008 Summer +16SAMP-13281 Aalborg East 2015-02-10 2015 Winter +16SAMP-626 Aalborg West 2011-10-28 2011 Fall +16SAMP-704 Aalborg East 2006-05-06 2006 Spring +16SAMP-2612 Aalborg East 2011-08-19 2011 Summer +16SAMP-746 Aalborg West 2009-05-06 2009 Spring +16SAMP-522 Aalborg East 2010-10-28 2010 Fall +16SAMP-516 Aalborg West 2009-10-28 2009 Fall +16S-AMP-1170 Aalborg West 2013-10-28 2013 Fall +16S-AMP-1099 Aalborg West 2012-05-06 2012 Spring +16SAMP-10932 Aalborg West 2015-10-27 2015 Fall +16SAMP-740 Aalborg East 2009-10-28 2009 Fall +16SAMP-739 Aalborg East 2009-05-06 2009 Spring +16SAMP-4597 Aalborg West 2014-05-05 2014 Spring +16SAMP-535 Aalborg West 2010-02-04 2010 Winter +16SAMP-3941 Aalborg West 2014-08-18 2014 Summer +16SAMP-3953 Aalborg West 2014-11-12 2014 Fall +16SAMP-720 Aalborg East 2007-10-28 2007 Fall +16SAMP-705 Aalborg East 2006-08-19 2006 Summer +16SAMP-10907 Aalborg East 2015-08-24 2015 Summer +16SAMP-538 Aalborg West 2010-10-28 2010 Fall +16SAMP-10911 Aalborg West 2015-08-24 2015 Summer +16SAMP-737 Aalborg West 2008-10-28 2008 Fall +16SAMP-4591 Aalborg West 2014-02-04 2014 Winter +16SAMP-745 Aalborg West 2009-02-04 2009 Winter +16SAMP-706 Aalborg East 2006-10-28 2006 Fall +16SAMP-3946 Aalborg East 2014-11-13 2014 Fall +16S-AMP-1101 Aalborg West 2012-10-28 2012 Fall +16SAMP-10896 Aalborg West 2015-05-04 2015 Spring +16SAMP-10891 Aalborg East 2015-05-04 2015 Spring +16SAMP-748 Aalborg East 2010-05-06 2010 Spring +16SAMP-725 Aalborg West 2007-02-04 2007 Winter +16SAMP-730 Aalborg East 2008-10-28 2008 Fall +16S-AMP-1107 Aalborg East 2013-05-06 2013 Spring +16SAMP-727 Aalborg East 2008-02-04 2008 Winter |