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tool_dependencies.xml |
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diff -r 000000000000 -r 9be1cbdae115 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue Feb 10 15:54:57 2015 -0500 |
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@@ -0,0 +1,24 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="trinityrnaseq" version="2013_08_14"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://sourceforge.net/projects/trinityrnaseq/files/trinityrnaseq_r2013_08_14.tgz</action> + <action type="shell_command">make</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + </action> + <action type="set_environment"> + <environment_variable name="TRINITY_HOME" action="set_to">$INSTALL_DIR</environment_variable> + </action> + </actions> + </install> + <readme> + </readme> + </package> +</tool_dependency> + |