| Previous changeset 18:dd7ad84f3943 (2022-02-21) Next changeset 20:78ced22d09a2 (2022-07-13) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit 1e2ff437ec47f8789e2309ee8c940c6451abfa0c" |
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modified:
spades.xml |
| b |
| diff -r dd7ad84f3943 -r 9be710099b99 spades.xml --- a/spades.xml Mon Feb 21 10:17:34 2022 +0000 +++ b/spades.xml Mon May 09 22:49:43 2022 +0000 |
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| @@ -1,4 +1,4 @@ -<tool id="spades" name="SPAdes" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> +<tool id="spades" name="SPAdes" version="@TOOL_VERSION@+galaxy1" profile="20.01"> <description>genome assembler for genomes of regular and single-cell projects</description> <macros> <import>macros.xml</import> @@ -32,7 +32,11 @@ @SANGER@ @CONTIGS@ ## parameter - --cov-cutoff $cov_cond.cov_cutoff + #if $cov_cond.cov_cutoff == 'value': + --cov-cutoff $cov_cond.manual + #else: + --cov-cutoff $cov_cond.cov_cutoff + #end if @KMER@ @PIPELINE_OPTIONS@ @PHREDOFFSET@ |