| Previous changeset 0:9dfb65ebb02e (2017-10-15) Next changeset 2:36103afa0934 (2018-06-19) |
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Commit message:
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/blastparser_and_hits commit dfecfb40f245a3cdb09dd1cfe37be4cb164ad2eb |
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modified:
BlastParser_and_hits.xml |
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| diff -r 9dfb65ebb02e -r 9beb85dba280 BlastParser_and_hits.xml --- a/BlastParser_and_hits.xml Sun Oct 15 18:43:37 2017 -0400 +++ b/BlastParser_and_hits.xml Fri Feb 16 04:54:52 2018 -0500 |
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| @@ -1,4 +1,4 @@ -<tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.5.0"> +<tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.5.1"> <description>for virus discovery</description> <requirements></requirements> <command><![CDATA[ @@ -25,7 +25,7 @@ <inputs> <param name="sequences" type="data" format="fasta" label="fasta sequences that have been blasted" /> <param name="blast" type="data" format="tabular" label="The blast output you wish to parse"> - <validator type="expression" message="Blast file must have 13 columns">value.metadata.columns == 13</validator> + <validator type="expression" message="Blast file must have 13 columns">value.metadata.columns == 13 or value.metadata.columns == 0</validator> </param> <param name="flanking" type="integer" value= "5" label="Number of flanking nucleotides to add to hits for CAP3 assembly"/> <param name="mode" type="select" label="Extensive or compact reporting mode" help="display (extensive) or not (compact) the oases contigs"> @@ -39,7 +39,7 @@ </param> <when value="no"> </when> - <when value="yes"> + <when value="yes"> <param name="filter_relativeCov" type="float" value="0" max="1" label="Minimum Relative Subject Coverage" help=""/> <param name="filter_maxScore" type="float" value="0" label="Minimum maximum BitScore" help=""/> <param name="filter_meanScore" type="float" value="0" label="Minimum mean BitScore" help=""/> |