Repository 'jbrowse2'
hg clone https://toolshed.g2.bx.psu.edu/repos/fubar/jbrowse2

Changeset 75:9c8459ce7d88 (2024-04-01)
Previous changeset 74:13ede71c3a4b (2024-04-01) Next changeset 76:9e3eb6b26f85 (2024-04-01)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit d03454f949af9f3fff638f6a3e52fe42bc96be3b-dirty
modified:
jbrowse2.py
b
diff -r 13ede71c3a4b -r 9c8459ce7d88 jbrowse2.py
--- a/jbrowse2.py Mon Apr 01 03:56:37 2024 +0000
+++ b/jbrowse2.py Mon Apr 01 04:03:16 2024 +0000
[
@@ -1487,7 +1487,8 @@
         session_spec = {"views": []}
         logging.debug("def ass_first=%s\ndata=%s" % (self.ass_first_contigs, data))
         for first_contig in self.ass_first_contigs:
-            gnome, refName, end = first_contig
+            logging.debug("first contig=%s" % self.ass_first_contigs)
+            [gnome, refName, end] = first_contig
             start = 0
             if False or data.get("defaultLocation", ""):
                 loc_match = re.search(