| Previous changeset 18:5252bbcfbdd7 (2019-05-10) Next changeset 20:77a2cd4162b7 (2019-06-28) |
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Commit message:
planemo upload commit 339ab77a83db03409c8001324f10b36ff5b13a39-dirty |
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modified:
README.rst id_converter.py id_converter.xml proteore_id_mapping_Human.loc.sample proteore_id_mapping_Mouse.loc.sample proteore_id_mapping_Rat.loc.sample |
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added:
tool-data/Human_id_mapping_13-06-2019.tsv tool-data/Human_id_mapping_27-05-2019.tsv tool-data/Mouse_id_mapping_13-06-2019.tsv tool-data/Mouse_id_mapping_27-05-2019.tsv tool-data/Rat_id_mapping_13-06-2019.tsv tool-data/Rat_id_mapping_27-05-2019.tsv |
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removed:
tool-data/Human_id_mapping_09-05-2019.tsv tool-data/Mouse_id_mapping_09-05-2019.tsv tool-data/Rat_id_mapping_09-05-2019.tsv |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e README.rst --- a/README.rst Fri May 10 10:38:46 2019 -0400 +++ b/README.rst Wed Jun 19 04:38:12 2019 -0400 |
| [ |
| @@ -63,33 +63,22 @@ Nextprot and OMIM are only available for Human. +.. class:: warningmark + +For Uniprot-AC, only Uniprot-AC reviewed are considered here, except for releases before 27-05-2019 where all uniprot-AC (at the time) are considered. + This tool converts human IDs using file built from: -* HUMAN_9606_idmapping_selected.tab (Uniprot 23/10/2018) - Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/ - -* HUMAN_9606_idmapping.dat (Uniprot 23/10/18) - Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/ - -* Human uniprot-AC entries reviewed : https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606&format=list - - -* nextprot_ac_list_all.txt (Nextprot released on 10/10/2018) - Downloaded from ftp://ftp.nextprot.org/pub/current_release/ac_lists/ - -* MOUSE_10090_idmapping_selected.tab (Uniprot 23/10/2018) - Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/ - -* MOUSE_10090_idmapping.dat (Uniprot 23/10/18) - Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/ - -* Mouse uniprot-AC entries reviewed : https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090&format=list - - -* RAT_10116_idmapping.dat (Uniprot 23/10/18) - Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/ - -* RAT_10116_idmapping_selected.tab (Uniprot 23/10/18) - Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/ - -* Rat uniprot-AC entries reviewed : https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116&format=list +* Current release of Uniprot, for idmapping_selected.tab and idmapping.dat for Human, Mouse and Rat: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism +* All previous release of uniprot can be found here: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/ +* **nextprot_ac_list_all.txt (Nextprot released on 13/02/2019 - current)**: ftp://ftp.nextprot.org/pub/current_release/ac_lists/ +* All previous release of **nextprot_ac_list_all.txt** can be foud here: ftp://ftp.nextprot.org/pub/previous_releases/ +* `Human uniprot-AC entries reviewed (05/06/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606+AND+created:[20120720%20TO%2020190605]&format=list>`_. +* `Mouse uniprot-AC entries reviewed (05/06/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090+AND+created:[20120720%20TO%2020190605]&format=list>`_. +* `Rat uniprot-AC entries reviewed (05/06/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116+AND+created:[20120720%20TO%2020190605]&format=list>`_. +* `Human uniprot-AC entries reviewed (08/05/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606+AND+created:[20120720%20TO%2020190508]&format=list>`_. +* `Mouse uniprot-AC entries reviewed (08/05/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090+AND+created:[20120720%20TO%2020190508]&format=list>`_. +* `Rat uniprot-AC entries reviewed (08/05/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116+AND+created:[20120720%20TO%2020190508]&format=list>`_. +* `Human uniprot-AC entries reviewed (10/10/2018) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606+AND+created:[20120720%20TO%2020181010]&format=list>`_. +* `Mouse uniprot-AC entries reviewed (10/10/2018) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090+AND+created:[20120720%20TO%2020181010]&format=list>`_. +* `Rat uniprot-AC entries reviewed (10/10/2018) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116+AND+created:[20120720%20TO%2020181010]&format=list>`_. |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e id_converter.py --- a/id_converter.py Fri May 10 10:38:46 2019 -0400 +++ b/id_converter.py Wed Jun 19 04:38:12 2019 -0400 |
| [ |
| @@ -58,9 +58,11 @@ return new_file, ids_list +#not used def output_one_id_one_line(line,convert_ids,target_ids): - ids_not_processed = ["GI","PDB","GO","PIR","MIM","UniGene","BioGrid","STRING"] #ids with multiple ids per line in output file + #ids_not_processed = ["GI","PDB","GO","PIR","MIM","UniGene","BioGrid","STRING"] #ids with multiple ids per line in output file + ids_not_processed = ["UniProt-AC","UniProt-AC_reviewed","UniProt-ID","GeneID","RefSeq","GI","PDB","GO","PIR","MIM","UniGene","Ensembl_Gene","Ensembl_Transcript","Ensembl_Protein","BioGrid","STRING","KEGG"] # All Ids ids_not_processed = [id for id in ids_not_processed if id in target_ids] #ids present in target_ids with multiple ids per line in output file for id_not_processed in ids_not_processed : @@ -125,6 +127,13 @@ return(ids_dictionary,ids_dictionary_index) +def create_header(input_file,ncol,id_type,target_ids): + col_names = list(range(1,len(input_file[0])+1)) + col_names = ["col"+str(e) for e in col_names] + col_names[ncol]=id_type + col_names = col_names+target_ids + return(col_names) + def main(): #Get args from command line @@ -158,13 +167,13 @@ ids_dictionary[id]={} for other_id_type in other_id_type_index : if ids_dictionary_index[other_id_type] not in ids_dictionary[id] : - ids_dictionary[id][ids_dictionary_index[other_id_type]] = set(line[other_id_type].replace(" ","").split(";")) + ids_dictionary[id][ids_dictionary_index[other_id_type]] = set(line[other_id_type].replace("NA","").replace(" ","").split(";")) else : - ids_dictionary[id][ids_dictionary_index[other_id_type]] |= set(line[other_id_type].replace(" ","").split(";")) + ids_dictionary[id][ids_dictionary_index[other_id_type]] |= set(line[other_id_type].replace("NA","").replace(" ","").split(";")) if len(ids_dictionary[id][ids_dictionary_index[other_id_type]]) > 1 and '' in ids_dictionary[id][ids_dictionary_index[other_id_type]] : ids_dictionary[id][ids_dictionary_index[other_id_type]].remove('') - print ("dictionary created") + #print ("dictionary created") #Get file and/or ids from input if args.input_type == "list" : @@ -172,14 +181,14 @@ elif args.input_type == "file" : input_file, ids = get_input_ids_from_file(args.input,args.column_number,header) - print ("starting mapping") + #print ("starting mapping") #Mapping ids result_dict = map_to_dictionary(ids,ids_dictionary,args.id_type,target_ids) - print ("mapping done") + #print ("mapping done") - print ("creating output file") + #print ("creating output file") #creating output file with open(args.output,"w") as output : writer = csv.writer(output,delimiter="\t") @@ -188,25 +197,31 @@ #write header if header : writer.writerow(input_file[0]+target_ids) - input_file = input_file[1:] - else : + input_file = input_file[1:] + elif args.input_type=="file": + col_names = create_header(input_file,args.column_number,args.id_type,target_ids) + writer.writerow(col_names) + else : writer.writerow([args.id_type]+target_ids) #write lines + previous_line="" if args.input_type=="file" : for line in input_file : - tmp = output_one_id_one_line(line,result_dict[line[args.column_number]],target_ids) - tmp = blank_to_NA(tmp) - for row in tmp : - writer.writerow(row) + res = [";".join(list(res_ids)) for res_ids in result_dict[line[args.column_number]]] + line = ["NA" if cell=="" or cell==" " or cell=="NaN" else cell for cell in line+res] + if previous_line != line : + writer.writerow(line) + previous_line=line elif args.input_type=="list" : for id in ids : - tmp = output_one_id_one_line([id],result_dict[id],target_ids) - tmp = blank_to_NA(tmp) - for row in tmp : - writer.writerow(row) + res = [";".join(list(res_ids)) for res_ids in result_dict[id]] + line = ["NA" if cell=="" or cell==" " or cell=="NaN" else cell for cell in [id]+res] + if previous_line != line : + writer.writerow(line) + previous_line=line - print ("output file created") + #print ("output file created") if __name__ == "__main__": main() |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e id_converter.xml --- a/id_converter.xml Fri May 10 10:38:46 2019 -0400 +++ b/id_converter.xml Wed Jun 19 04:38:12 2019 -0400 |
| [ |
| b'@@ -1,4 +1,4 @@\n-<tool id="IDconverter" name="ID Converter" version="2019.05.10">\n+<tool id="IDconverter" name="ID Converter" version="2019.06.18">\n <description>(Human, Mouse, Rat)\n </description>\n <requirements>\n@@ -59,8 +59,8 @@\n <conditional name="species">\n <param name="species" type="select" label="Species">\n <option value="Human" selected="True">Human (Homo sapiens)</option>\n- <option value="Mouse" selected="True">Mouse (Mus musculus)</option>\n- <option value="Rat" selected="True">Rat (Rattus norvegicus)</option>\n+ <option value="Mouse">Mouse (Mus musculus)</option>\n+ <option value="Rat">Rat (Rattus norvegicus)</option>\n </param>\n <when value="Human">\n <param name="mapping_file" type="select" label="Release" >\n@@ -90,8 +90,8 @@\n <section name="idto" title="Target type" expanded="True" >\n <param name="idtypeout" type="select" label="Target type of IDs you would like to map to" display="checkboxes" multiple="True" optional="false" >\n <option value="neXtProt" >neXtProt ID (e.g. NX_P31946)</option>\n- <option value="UniProt-AC_reviewed" >UniProt accession number (e.g. P31946 - reviewed entries only)</option>\n- <option value="UniProt-AC" >UniProt accession number (e.g. P31946 - reviewed and unreviewed entries)</option>\n+ <option value="UniProt-AC" >UniProt accession number (e.g. P31946 - reviewed entries only)</option>\n+ <!--option value="UniProt-AC" >UniProt accession number (e.g. P31946 - reviewed and unreviewed entries)</option-->\n <option value="UniProt-ID" >UniProt ID (e.g 1433B_HUMAN)</option>\n <option value="GeneID" >Entrez gene ID (e.g. 7529)</option>\n <option value="RefSeq" >RefSeq (NCBI) protein (e.g. NP_003395.1)</option>\n@@ -117,41 +117,40 @@\n </options>\n </param> \n <param name="idtypein" type="select" label="Type/source of IDs" optional="false" >\n- <option value="UniProt-AC" selected="True" >UniProt accession number (e.g. P31946)</option>\n- <option value="UniProt-ID" >UniProt ID (e.g 1433B_HUMAN)</option>\n- <option value="GeneID" >Entrez gene ID (e.g. 7529)</option>\n- <option value="RefSeq" >RefSeq (NCBI) protein (e.g. NP_003395.1)</option>\n- <option value="GI" >GI (NCBI GI number) (e.g. 21328448)</option>\n- <option value="PDB" >Protein DataBank ID (e.g. 2BR9:A)</option>\n- <option value="GO" >GOterms (Gene Ontology) ID (e.g. GO:0070062)</option>\n- <option value="PIR" >Protein Information Resource ID (e.g. S34755)</option>\n- <option value="MIM" >OMIM (Online Mendelian Inheritance in Man database) ID (e.g: 601289)</option>\n- <option value="UniGene" >Unigene ID (e.g. Hs.643544)</option>\n- <option value="Ensembl_Gene" >Ensembl gene ID (e.g. ENSG00000166913)</option>\n- <option value="Ensembl_Transcript" >Ensembl transcript ID (e.g. ENST00000353703)</option>\n- <option value="Ensembl_Protein" >Ensembl protein ID (e.g. ENSP00000300161)</option>\n- <option value="BioGrid" >BioGrid (e.g. 113361)</option>\n- <option value="STRING" >STRING (e.g. 9606.ENSP00000300161)</option>\n- <option value="KEGG" >KEGG gene id (e.g. hsa:7529)</option>\n+ <option value="UniProt-AC" selected="True" >UniProt accession number (e.g. Q8VC49)</option>\n+ <option value="UniProt-ID" >UniProt ID (e.g IF27B_MOUSE)</option>\n+ <option value="GeneID" >Entrez gene ID (e.g. 217845)</'..b'529)\n \n@@ -285,6 +285,10 @@\n \n Nextprot and OMIM only applicable to Human species.\n \n+.. class:: warningmark\n+\n+For Uniprot-AC and uniprot-ID, only reviewed IDs are considered here, except for releases before 08-05-2019 where all uniprot-AC and uniprot-ID (at the time) are considered.\n+\n -----\n \n **Output**\n@@ -298,16 +302,19 @@\n \n This tool converts human IDs using the following source files:\n \n-- **HUMAN_9606_idmapping_selected.tab (Uniprot 23/10/2018)**: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/\n-- **HUMAN_9606_idmapping.dat (Uniprot 23/10/18)**: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/\n-- `Human uniprot-AC entries reviewed <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606&format=list>`_. \n-- **nextprot_ac_list_all.txt (Nextprot released on 10/10/2018)**: ftp://ftp.nextprot.org/pub/current_release/ac_lists/\n-- **MOUSE_10090_idmapping_selected.tab (Uniprot 23/10/2018)**: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/\n-- **MOUSE_10090_idmapping.dat (Uniprot 23/10/18)**: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/\n-- `Mouse uniprot-AC entries reviewed <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090&format=list>`_. \n-- **RAT_10116_idmapping.dat (Uniprot 23/10/18)**: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/\n-- **RAT_10116_idmapping_selected.tab (Uniprot 23/10/18)**: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/\n-- `Rat uniprot-AC entries reviewed <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116&format=list>`_.\n+- Current release of Uniprot, for idmapping_selected.tab and idmapping.dat for Human, Mouse and Rat: ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism\n+- All previous release of uniprot can be found here: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/\n+- **nextprot_ac_list_all.txt (Nextprot released on 13/02/2019 - current)**: ftp://ftp.nextprot.org/pub/current_release/ac_lists/\n+- All previous release of **nextprot_ac_list_all.txt** can be foud here: ftp://ftp.nextprot.org/pub/previous_releases/\n+- `Human uniprot-AC entries reviewed (05/06/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606+AND+created:[20120720%20TO%2020190605]&format=list>`_. \n+- `Mouse uniprot-AC entries reviewed (05/06/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090+AND+created:[20120720%20TO%2020190605]&format=list>`_. \n+- `Rat uniprot-AC entries reviewed (05/06/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116+AND+created:[20120720%20TO%2020190605]&format=list>`_.\n+- `Human uniprot-AC entries reviewed (08/05/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606+AND+created:[20120720%20TO%2020190508]&format=list>`_. \n+- `Mouse uniprot-AC entries reviewed (08/05/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090+AND+created:[20120720%20TO%2020190508]&format=list>`_. \n+- `Rat uniprot-AC entries reviewed (08/05/2019) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116+AND+created:[20120720%20TO%2020190508]&format=list>`_.\n+- `Human uniprot-AC entries reviewed (10/10/2018) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:9606+AND+created:[20120720%20TO%2020181010]&format=list>`_. \n+- `Mouse uniprot-AC entries reviewed (10/10/2018) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10090+AND+created:[20120720%20TO%2020181010]&format=list>`_. \n+- `Rat uniprot-AC entries reviewed (10/10/2018) <https://www.uniprot.org/uniprot/?query=reviewed:yes+AND+organism:10116+AND+created:[20120720%20TO%2020181010]&format=list>`_.\n \n -----\n \n' |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e proteore_id_mapping_Human.loc.sample --- a/proteore_id_mapping_Human.loc.sample Fri May 10 10:38:46 2019 -0400 +++ b/proteore_id_mapping_Human.loc.sample Wed Jun 19 04:38:12 2019 -0400 |
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| @@ -1,3 +1,6 @@ #This file lists the locations of reference file for id_converter tool #<id> <release> <name> <species> <value> -9979818977 human_id_mapping_23-10-2018 Human (homo sapiens 23/10/2018) Human tool-data/human_id_mapping_23-10-2018.tsv +9979818977 human_id_mapping_23-10-2018 Human (homo sapiens 10/10/2018) Human tool-data/human_id_mapping_23-10-2018.tsv +9979809473 Human_id_mapping_27-05-2019 Human (homo sapiens 08/05/2019) Human tool-data/Human_id_mapping_27-05-2019.tsv +9979809387 Human_id_mapping_13-06-2019 Human (Homo sapiens 05/06/2019) Human tool-data/Human_id_mapping_13-06-2019.tsv + |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e proteore_id_mapping_Mouse.loc.sample --- a/proteore_id_mapping_Mouse.loc.sample Fri May 10 10:38:46 2019 -0400 +++ b/proteore_id_mapping_Mouse.loc.sample Wed Jun 19 04:38:12 2019 -0400 |
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| @@ -1,3 +1,6 @@ #This file lists the locations of reference file for id_converter tool #<id> <release> <name> <species> <value> -9979818977 mouse_id_mapping_23-10-2018 Mouse (Mus musculus 23-10-2018) Mouse tool-data/mouse_id_mapping_23-10-2018.tsv +9979818977 mouse_id_mapping_23-10-2018 Mouse (Mus musculus 10/10/2018) Mouse tool-data/mouse_id_mapping_23-10-2018.tsv +9979809473 Mouse_id_mapping_27-05-2019 Mouse (Mus musculus 08/05/2019) Mouse tool-data/Mouse_id_mapping_27-05-2019.tsv +9979809387 Mouse_id_mapping_13-06-2019 Mouse (Mus musculus 05/06/2019) Mouse tool-data/Mouse_id_mapping_13-06-2019.tsv + |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e proteore_id_mapping_Rat.loc.sample --- a/proteore_id_mapping_Rat.loc.sample Fri May 10 10:38:46 2019 -0400 +++ b/proteore_id_mapping_Rat.loc.sample Wed Jun 19 04:38:12 2019 -0400 |
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| @@ -1,3 +1,6 @@ #This file lists the locations of reference file for id_converter tool #<id> <release> <name> <species> <value> -9979818977 rat_id_mapping_23-10-2018 Rat (Rattus norvegicus 23-10-2018) Rat tool-data/rat_id_mapping_23-10-2018.tsv +9979818977 rat_id_mapping_23-10-2018 Rat (Rattus norvegicus 10/10/2018) Rat tool-data/rat_id_mapping_23-10-2018.tsv +9979809473 Rat_id_mapping_27-05-2019 Rat (Rattus norvegicus 08/05/2019) Rat tool-data/Rat_id_mapping_27-05-2019.tsv +9979809387 Rat_id_mapping_13-06-2019 Rat (Rattus norvegicus 05/06/2019) Rat tool-data/Rat_id_mapping_13-06-2019.tsv + |
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| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Human_id_mapping_09-05-2019.tsv --- a/tool-data/Human_id_mapping_09-05-2019.tsv Fri May 10 10:38:46 2019 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| b'@@ -1,171064 +0,0 @@\n-UniProt-AC\tUniProt-AC_reviewed\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tneXtProt\tBioGrid\tSTRING\tKEGG\r\n-P31946\tP31946\t1433B_HUMAN\t7529\tNP_003395.1; NP_647539.1; XP_016883528.1\t4507949; 377656702; 67464628; 1345590; 1034625756; 21328448; 377656701; 67464627; 78101741\t2BQ0:A; 2BQ0:B; 2C23:A; 4DNK:A; 4DNK:B; 5N10:A; 5N10:B; 6A5Q:A; 6A5Q:B; 6A5Q:C; 6BYK:A; 6BYK:B; 6BYK:C; 6BYK:D; 6GN0:A; 6GN0:B; 6GN0:C; 6GN0:D; 6GN8:A; 6GN8:B; 6GNJ:A; 6GNJ:B; 6GNK:A; 6GNK:B; 6GNN:A; 6HEP:A; 6HEP:B; 6HEP:C; 6HEP:D\tGO:0005737; GO:0005829; GO:0070062; GO:0005925; GO:0042470; GO:0016020; GO:0005739; GO:0005634; GO:0048471; GO:0017053; GO:0005774; GO:0045296; GO:0019899; GO:0042826; GO:0042802; GO:0051219; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0035329; GO:0000165; GO:0061024; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:1900740; GO:0051291; GO:0006605; GO:0043488; GO:0016032\tS34755\t601289\t\tENSG00000166913\tENST00000353703; ENST00000372839\tNX_P31946\tNX_P31946\t113361\t9606.ENSP00000361930\thsa:7529\r\n-P62258\tP62258\t1433E_HUMAN\t7531\tNP_006752.1\t374074368; 62131678; 67464424; 194379794; 221045758; 5803225; 374074366; 51702210\t2BR9:A; 3UAL:A; 3UBW:A; 6EIH:A\tGO:0090724; GO:0005737; GO:0005829; GO:0070062; GO:0005925; GO:0098978; GO:0005871; GO:0042470; GO:0016020; GO:0005739; GO:0005634; GO:0045296; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0023026; GO:0051219; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0003723; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0097711; GO:0000086; GO:0035329; GO:0021766; GO:0035556; GO:0000165; GO:0061024; GO:0086013; GO:1905913; GO:1901020; GO:0043154; GO:1902309; GO:0001764; GO:0046827; GO:1900740; GO:0034504; GO:0006605; GO:1900034; GO:0051480; GO:0010389; GO:0086091; GO:0003064; GO:0060306; GO:0099072; GO:1901016; GO:0021762; GO:0016032\tA61235; I38947\t605066\t\tENSG00000108953; ENSG00000274474\tENST00000264335; ENST00000571732; ENST00000616643; ENST00000627231\tNX_P62258\tNX_P62258\t113363\t9606.ENSP00000264335\thsa:7531\r\n-Q04917\tQ04917\t1433F_HUMAN\t7533\tNP_003396.1\t4507951; 437363; 83754686; 83754699; 83754700; 1345593; 83754684; 83754685; 28862; 83754683\t2C63:A; 2C63:B; 2C63:C; 2C63:D; 2C74:A; 2C74:B\tGO:0005737; GO:0005829; GO:0070062; GO:0098978; GO:0014704; GO:0005739; GO:0005886; GO:0098793; GO:0003779; GO:0019899; GO:0035259; GO:0042802; GO:0005159; GO:0044325; GO:0019904; GO:0046982; GO:0017080; GO:0006713; GO:0042921; GO:0006886; GO:0086010; GO:0061024; GO:0050774; GO:1900740; GO:0045893; GO:0045664; GO:2000649; GO:0002028; GO:0048167; GO:0021762\tS34756; S38509; S38532\t113508\t\tENSG00000128245\tENST00000248975\tNX_Q04917\tNX_Q04917\t113365\t9606.ENSP00000248975\thsa:7533\r\n-P61981\tP61981\t1433G_HUMAN\t7532\tNP_036611.2\t6016838; 380764684; 635576381; 82407956; 82407958; 550545213; 635576377; 380765197; 82407950; 550545214; 119592210; 1006588564; 1006588561; 635576379; 21464101; 82407952; 48428721; 5726310; 550545212; 635576378; 1006588559; 18088513; 49456805; 1006588565; 550545215; 1006588558; 49456763; 1006588562; 82407948; 82407954; 635576376; 635576380\t2B05:A; 2B05:B; 2B05:C; 2B05:D; 2B05:E; 2B05:F; 3UZD:A; 4E2E:A; 4J6S:A; 4J6S:B; 4J6S:C; 4J6S:D; 4O46:A; 4O46:B; 4O46:C; 4O46:D; 4O46:E; 4O46:F; 5D3E:A; 5D3E:B; 5D3E:E; 5D3E:F; 5D3E:I; 5D3E:J; 6A5S:A; 6A5S:B; 6A5S:D; 6A5S:G; 6BYJ:A; 6BYJ:B; 6BYJ:C; 6BYJ:D; 6BYJ:E; 6BYJ:F; 6BYL:A; 6BYL:B; 6BYL:C; 6BYL:D; 6BYL:E; 6BYL:F; 6BZD:A; 6BZD:B; 6BZD:C; 6BZD:D; 6FEL:A; 6FEL:B; 6FEL:C; 6FEL:D; 6GKF:A; 6GKF:B; 6GKF:C; 6GKF:D; 6GKF:E; 6GKF:F; 6GKF:G; 6GKF:H; 6GKG:A; 6GKG:B; 6GKG:C; 6GKG:D; 6GKG:E; 6GKG:F; 6GKG:G; 6GKG:H\tGO:0005829; GO:0070062; GO:0005925; GO:0016020; GO:0005739; GO:0098793; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0008426; GO:0030971; GO:0003723; GO:0032869; GO:0097711; GO:0000086; GO:0061024; GO:0006469; GO:1900740; GO:0006605; GO:0010389; GO:0045664; GO:0009966; GO:0048167\t\t605356; 617665\t\tENSG00000170027\tENST00000307630\tNX_P61981\tNX'..b'\n-A0A343UBE2\t\tA0A343UBE2_HUMAN\t\t\t1341385077\t\tGO:0016021; GO:0005743; GO:0045277; GO:0004129; GO:0020037; GO:0046872; GO:0009060; GO:0006119\t\t\t\t\t\t\t\t\t\t\r\n-A0A1B0GW03\t\tA0A1B0GW03_HUMAN\t\t\t\t\t\t\t\t\tENSG00000143850\tENST00000564627\tENSP00000490720\t\t\t\t\r\n-A0A1B0GWH1\t\tA0A1B0GWH1_HUMAN\t\t\t\t\tGO:0016021; GO:0005230; GO:0004888\t\t\t\tENSG00000175344\tENST00000637519\tENSP00000490924\t\t\t\t\r\n-U5L326\t\tU5L326_HUMAN\t\t\t545397061\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n-A0A0A7C7H4\t\tA0A0A7C7H4_HUMAN\t\t\t628821518\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A0A7CAH8\t\tA0A0A7CAH8_HUMAN\t\t\t628822831\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n-A0A186VNE1\t\tA0A186VNE1_HUMAN\t\t\t844316439\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n-Q8N7Y7\t\tQ8N7Y7_HUMAN\t\t\t21757324\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A0F6MY87\t\tA0A0F6MY87_HUMAN\t\t\t597501044\t\t\t\t\t\t\t\t\t\t\t\t\r\n-L0R542\t\tL0R542_HUMAN\t\t\t440576005\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A0E3DDA8\t\tA0A0E3DDA8_HUMAN\t\t\t631899380\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A0U1RQL4\t\tA0A0U1RQL4_HUMAN\t\t\t\t\t\t\t\t\tENSG00000160185\tENST00000635189\tENSP00000489058\t\t\t\t\r\n-A0A2R8YCW3\t\tA0A2R8YCW3_HUMAN\t\t\t\t\t\t\t\t\tENSG00000130856\tENST00000645888\tENSP00000494034\t\t\t\t\r\n-A0A3B3ISV9\t\tA0A3B3ISV9_HUMAN\t\t\t\t\tGO:0003676\t\t\t\tENSG00000117419\tENST00000649995\tENSP00000497624\t\t\t\t\r\n-C6GLV5\t\tC6GLV5_HUMAN\t\t\t242381001\t\t\t\t\t\t\t\t\t\t\t\t\r\n-B7Z8D1\t\tB7Z8D1_HUMAN\t\t\t221044480\t\t\t\t\t\t\t\t\t\t\t\t\r\n-G1EPR9\t\tG1EPR9_HUMAN\t\t\t341838790\t\t\t\t\t\t\t\t\t\t\t\t\r\n-B0LXF6\t\tB0LXF6_HUMAN\t\t\t166204135\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A059QUY0\t\tA0A059QUY0_HUMAN\t\t\t545755643\t\tGO:0016021; GO:0005743; GO:0055114\t\t\t\t\t\t\t\t\t\t\r\n-F1AHJ1\t\tF1AHJ1_HUMAN\t\t\t322835725\t\t\t\t\t\t\t\t\t\t\t\t\r\n-F4NBX3\t\tF4NBX3_HUMAN\t\t\t329581895\t\tGO:0016021\t\t\t\t\t\t\t\t\t\t\r\n-M9PNN8\t\tM9PNN8_HUMAN\t\t\t449332030\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A059QQR4\t\tA0A059QQR4_HUMAN\t\t\t545754081\t\tGO:0016021; GO:0005739; GO:0004129; GO:0019646\t\t\t\t\t\t\t\t\t\t\r\n-A0A059RDU1\t\tA0A059RDU1_HUMAN\t\t\t545762804\t\tGO:0016021; GO:0031966; GO:0070469; GO:0016651; GO:0042773\t\t\t\t\t\t\t\t\t\t\r\n-A0A186VN48\t\tA0A186VN48_HUMAN\t\t\t844316164\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A0U4ARJ3\t\tA0A0U4ARJ3_HUMAN\t\t\t972988098\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A0N7A4T4\t\tA0A0N7A4T4_HUMAN\t\t\t723439372\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n-A0A0P0HNE9\t\tA0A0P0HNE9_HUMAN\t\t\t939232230\t\tGO:0016021; GO:0005886; GO:0004980\t\t\t\t\t\t\t\t\t\t\r\n-A0A2U7MZA8\t\tA0A2U7MZA8_HUMAN\t\t\t1202137580\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n-A0A343GTV3\t\tA0A343GTV3_HUMAN\t\t\t1228320324\t\tGO:0016021; GO:0031966; GO:0070469; GO:0016651; GO:0042773\t\t\t\t\t\t\t\t\t\t\r\n-A0A346LZW0\t\tA0A346LZW0_HUMAN\t\t\t1464230248\t\tGO:0016021; GO:0005743; GO:0070469; GO:0004129; GO:0020037; GO:0046872; GO:0009060; GO:0006119\t\t\t\t\t\t\t\t\t\t\r\n-A0A386NC05\t\tA0A386NC05_HUMAN\t\t\t1484127305\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A3B3IT61\t\tA0A3B3IT61_HUMAN\t\t\t384096922\t\tGO:0046872\t\t\t\tENSG00000129170\tENST00000648719\tENSP00000497633\t\t\t\t\r\n-A0A3B3ISH5\t\tA0A3B3ISH5_HUMAN\t\t\t\t\t\t\t\t\tENSG00000187498\tENST00000649484\tENSP00000497355\t\t\t\t\r\n-A0A3B3ITT4\t\tA0A3B3ITT4_HUMAN\t\t\t\t\tGO:0047045; GO:0030539; GO:0061370\t\t\t\tENSG00000130948\tENST00000648799\tENSP00000498039\t\t\t\t\r\n-A0A023QXG8\t\tA0A023QXG8_HUMAN\t\t\t614528318\t\tGO:0016021; GO:0005743; GO:0055114\t\t\t\t\t\t\t\t\t\t\r\n-F8SY65\t\tF8SY65_HUMAN\t\t\t338223266\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n-I6NS60\t\tI6NS60_HUMAN\t\t\t375174267\t\t\t\t\t\t\t\t\t\t\t\t\r\n-M9P9Y3\t\tM9P9Y3_HUMAN\t\t\t429508971\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n-A0A090N8Z3\t\tA0A090N8Z3_HUMAN\t\t\t51105896\t\tGO:0016021; GO:0005524; GO:0004672\t\t\t\t\t\t\t\t\t\t\r\n-A0A1B0GU39\t\tA0A1B0GU39_HUMAN\t\t\t\t\t\t\t\t\tENSG00000128973\tENST00000636876\tENSP00000489950\t\t\t\t\r\n-A0A1B0GUE6\t\tA0A1B0GUE6_HUMAN\t\t\t\t\t\t\t\t\tENSG00000267710\tENST00000593116\tENSP00000490076\t\t\t\t\r\n-E7E3U7\t\tE7E3U7_HUMAN\t\t\t315114574\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n-A4D2M2\t\tA4D2M2_HUMAN\t\t\t51094476\t\t\t\t\t\t\t\t\t\t\t\t\r\n-A9X3Y2\t\tA9X3Y2_HUMAN\t\t\t87137304\t\tGO:0016301\t\t\t\t\t\t\t\t\t\t\r\n-A0A075C9B0\t\tA0A075C9B0_HUMAN\t\t\t545749586\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n-A0A059RL82\t\tA0A059RL82_HUMAN\t\t\t545766497\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n-D3U3M9\t\tD3U3M9_HUMAN\t\t\t224995005\t\t\t\t\t\t\t\t\t\t\t\t\r\n-L7WMV4\t\tL7WMV4_HUMAN\t\t\t443302586\t\t\t\t\t\t\t\t\t\t\t\t\r\n-L8E9R0\t\tL8E9R0_HUMAN\t\t\t444738033\t\t\t\t\t\t\t\t\t\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Human_id_mapping_13-06-2019.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/Human_id_mapping_13-06-2019.tsv Wed Jun 19 04:38:12 2019 -0400 |
| b |
| b'@@ -0,0 +1,172143 @@\n+UniProt-AC\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tneXtProt\tBioGrid\tSTRING\tKEGG\r\n+P31946\t1433B_HUMAN\t7529\tNP_003395.1; NP_647539.1; XP_016883528.1\t4507949; 377656702; 67464628; 1345590; 1034625756; 21328448; 377656701; 67464627; 78101741\t2BQ0:A; 2BQ0:B; 2C23:A; 4DNK:A; 4DNK:B; 5N10:A; 5N10:B; 6A5Q:A; 6A5Q:B; 6A5Q:C; 6BYK:A; 6BYK:B; 6BYK:C; 6BYK:D; 6GN0:A; 6GN0:B; 6GN0:C; 6GN0:D; 6GN8:A; 6GN8:B; 6GNJ:A; 6GNJ:B; 6GNK:A; 6GNK:B; 6GNN:A; 6HEP:A; 6HEP:B; 6HEP:C; 6HEP:D\tGO:0005737; GO:0005829; GO:0070062; GO:0005925; GO:0042470; GO:0016020; GO:0005739; GO:0005634; GO:0048471; GO:0017053; GO:0005774; GO:0045296; GO:0019899; GO:0042826; GO:0042802; GO:0051219; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0035329; GO:0000165; GO:0061024; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:1900740; GO:0051291; GO:0006605; GO:0043488; GO:0016032\tS34755\t601289\t\tENSG00000166913\tENST00000353703; ENST00000372839\tENSP00000300161; ENSP00000361930\tNX_P31946\t113361\t9606.ENSP00000361930\thsa:7529\r\n+P62258\t1433E_HUMAN\t7531\tNP_006752.1\t374074368; 62131678; 67464424; 194379794; 221045758; 5803225; 374074366; 51702210\t2BR9:A; 3UAL:A; 3UBW:A; 6EIH:A\tGO:0090724; GO:0005737; GO:0005829; GO:0070062; GO:0005925; GO:0098978; GO:0005871; GO:0042470; GO:0016020; GO:0005739; GO:0005634; GO:0045296; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0023026; GO:0051219; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0003723; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0097711; GO:0000086; GO:0035329; GO:0021766; GO:0035556; GO:0000165; GO:0061024; GO:0086013; GO:1905913; GO:1901020; GO:0043154; GO:1902309; GO:0001764; GO:0046827; GO:1900740; GO:0034504; GO:0006605; GO:1900034; GO:0051480; GO:0010389; GO:0086091; GO:0003064; GO:0060306; GO:0099072; GO:1901016; GO:0021762; GO:0016032\tA61235; I38947\t605066\t\tENSG00000108953; ENSG00000274474\tENST00000264335; ENST00000571732; ENST00000616643; ENST00000627231\tENSP00000264335; ENSP00000461762; ENSP00000481059; ENSP00000487356\tNX_P62258\t113363\t9606.ENSP00000264335\thsa:7531\r\n+Q04917\t1433F_HUMAN\t7533\tNP_003396.1\t4507951; 437363; 83754686; 83754699; 83754700; 1345593; 83754684; 83754685; 28862; 83754683\t2C63:A; 2C63:B; 2C63:C; 2C63:D; 2C74:A; 2C74:B\tGO:0005737; GO:0005829; GO:0070062; GO:0014704; GO:0005739; GO:0005886; GO:0003779; GO:0019899; GO:0035259; GO:0042802; GO:0005159; GO:0044325; GO:0019904; GO:0046982; GO:0017080; GO:0006713; GO:0042921; GO:0006886; GO:0086010; GO:0061024; GO:0050774; GO:1900740; GO:0045893; GO:0045664; GO:2000649; GO:0002028; GO:0048167; GO:0021762\tS34756; S38509; S38532\t113508\t\tENSG00000128245\tENST00000248975\tENSP00000248975\tNX_Q04917\t113365\t9606.ENSP00000248975\thsa:7533\r\n+P61981\t1433G_HUMAN\t7532\tNP_036611.2\t6016838; 380764684; 635576381; 82407956; 82407958; 550545213; 635576377; 380765197; 82407950; 550545214; 119592210; 1006588564; 1006588561; 635576379; 21464101; 82407952; 48428721; 5726310; 550545212; 635576378; 1006588559; 18088513; 49456805; 1006588565; 550545215; 1006588558; 49456763; 1006588562; 82407948; 82407954; 635576376; 635576380\t2B05:A; 2B05:B; 2B05:C; 2B05:D; 2B05:E; 2B05:F; 3UZD:A; 4E2E:A; 4J6S:A; 4J6S:B; 4J6S:C; 4J6S:D; 4O46:A; 4O46:B; 4O46:C; 4O46:D; 4O46:E; 4O46:F; 5D3E:A; 5D3E:B; 5D3E:E; 5D3E:F; 5D3E:I; 5D3E:J; 6A5S:A; 6A5S:B; 6A5S:D; 6A5S:G; 6BYJ:A; 6BYJ:B; 6BYJ:C; 6BYJ:D; 6BYJ:E; 6BYJ:F; 6BYL:A; 6BYL:B; 6BYL:C; 6BYL:D; 6BYL:E; 6BYL:F; 6BZD:A; 6BZD:B; 6BZD:C; 6BZD:D; 6FEL:A; 6FEL:B; 6FEL:C; 6FEL:D; 6GKF:A; 6GKF:B; 6GKF:C; 6GKF:D; 6GKF:E; 6GKF:F; 6GKF:G; 6GKF:H; 6GKG:A; 6GKG:B; 6GKG:C; 6GKG:D; 6GKG:E; 6GKG:F; 6GKG:G; 6GKG:H\tGO:0005829; GO:0070062; GO:0005925; GO:0016020; GO:0005739; GO:0098793; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0008426; GO:0030971; GO:0003723; GO:0032869; GO:0097711; GO:0000086; GO:0061024; GO:0006469; GO:1900740; GO:0006605; GO:0010389; GO:0045664; GO:0009966; GO:0048167\t\t605356; 617665\t\tENSG00000170027\tENST0000030763'..b'O:0005765; GO:0005524; GO:0015440; GO:0015833\t\t\t\tENSG00000150967\tENST00000545373\tENSP00000444834\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016020; GO:0005509; GO:0007156\t\t\t\tENSG00000139182\tENST00000545663\tENSP00000442612\t\t\t\t\r\n+\t\t\t\t363412910\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t363413012\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t359468880\t\tGO:0016021; GO:0005743; GO:0070469; GO:0008137; GO:0042773\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t449332007\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t676254197\t\tGO:0034464; GO:1905515\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t157365208\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t158260681\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSG00000135083\tENST00000520748\tENSP00000428836\t\t\t\t\r\n+\t\t\t\t334849424\t\tGO:0016021\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t334849634\t\tGO:0016021\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t178516\t\tGO:0042613; GO:0019882; GO:0006955\tB30575; C33287; PH0158\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t84783998\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016787\t\t\t\tENSG00000108039\tENST00000423625\tENSP00000410318\t\t\t\t\r\n+\t\t\t\t21410966\t\tGO:0005765; GO:0042626\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t260513912\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t294357572\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t333034485\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSG00000198089\tENST00000425671\tENSP00000416931\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016758\t\t\t\tENSG00000244122\tENST00000485022\tENSP00000420181\t\t\t\t\r\n+\t\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSG00000172172\tENST00000521648\tENSP00000428229\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSG00000156170\tENST00000517976\tENSP00000430099\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSG00000165568\tENST00000525572\tENSP00000433496\t\t\t\t\r\n+\t\t\t\t\t\tGO:0005509\t\t\t\tENSG00000175356\tENST00000531429\tENSP00000434000\t\t\t\t\r\n+\t\t\t\t\t\tGO:0005524; GO:0004672\t\t\t\tENSG00000166483\tENST00000530175\tENSP00000435945\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016021; GO:0022857\t\t\t\tENSG00000110446\tENST00000537307\tENSP00000437908\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016021; GO:0031902; GO:0005765; GO:0034597; GO:0046856\t\t\t\tENSG00000165782\tENST00000553460\tENSP00000451014\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSG00000104047\tENST00000557988\tENSP00000453686\t\t\t\t\r\n+\t\t\t\t375174113\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t375174299\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t392514865\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t1906678\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016021; GO:0022857\t\t\t\tENSG00000102743\tENST00000417731\tENSP00000415826\t\t\t\t\r\n+\t\t\t\t23304366\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t545771829\t\tGO:0016021; GO:0005743; GO:0070469; GO:0005507; GO:0004129\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t1032798024\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t145558663\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t197116063\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t226247208\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t226446710\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSG00000170074\tENST00000515787\tENSP00000425931\t\t\t\t\r\n+\t\t\t\t294356414\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t381218707\t\tGO:0016021; GO:0005743; GO:0045275; GO:0046872; GO:0008121; GO:0006122\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSG00000122026\tENST00000483765\tENSP00000473246\t\t\t\t\r\n+\t\t\t\t7705117\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t13242742\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t13347121\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t37719435\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t16552475\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t55005\tNP_001258866.1\t429836856\t\t\t\t\t\tENSG00000155906\tENST00000622845\tENSP00000481280\t\t\t\t\r\n+\t\t\t\t698975608\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t255340118\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t225130509\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t225130815\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t444733075\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0016020; GO:0005525\t\t\t\tENSG00000124449\tENST00000596627\tENSP00000471425\t\t\t\t\r\n+\t\t\t\t639905\t\tGO:0042613; GO:0019882; GO:0006955\tI38425\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t129561111\t\tGO:0030154\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t225130833\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t226316155\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t429508773\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t109716231\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t49457063\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t41351278\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t6690043\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t553561; 38635919; 628822165; 553542\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t257070907\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t380750012\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t109693330\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0031175\t\t\t\tENSG00000018236\tENST00000552248\tENSP00000447860\t\t\t\t\r\n+\t\t\t\t\t\tGO:0032559; GO:0071900\t\t\t\tENSG00000181929\tENST00000548605\tENSP00000449104\t\t\t\t\r\n+\t\t\t\t\t\tGO:0009982; GO:0003723; GO:0001522\t\t\t\tENSG00000129317\tENST00000553166\tENSP00000446865\t\t\t\t\r\n+\t\t\t\t379996952\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t553563; 38635917\t\tGO:0042613; GO:0019882; GO:0006955\tD30537; H30536\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t62630110\t\tGO:0005524; GO:0004713\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t50404758\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t49456803\t\tGO:0005576; GO:0005179\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t40557131\t\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t2576418\t\t\t\t\t\t\t\t\t\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Human_id_mapping_27-05-2019.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/Human_id_mapping_27-05-2019.tsv Wed Jun 19 04:38:12 2019 -0400 |
| b |
| b'@@ -0,0 +1,171064 @@\n+UniProt-AC\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tneXtProt\tBioGrid\tSTRING\tKEGG\r\n+P31946\t1433B_HUMAN\t7529\tNP_003395.1; NP_647539.1; XP_016883528.1\t4507949; 377656702; 67464628; 1345590; 1034625756; 21328448; 377656701; 67464627; 78101741\t2BQ0:A; 2BQ0:B; 2C23:A; 4DNK:A; 4DNK:B; 5N10:A; 5N10:B; 6A5Q:A; 6A5Q:B; 6A5Q:C; 6BYK:A; 6BYK:B; 6BYK:C; 6BYK:D; 6GN0:A; 6GN0:B; 6GN0:C; 6GN0:D; 6GN8:A; 6GN8:B; 6GNJ:A; 6GNJ:B; 6GNK:A; 6GNK:B; 6GNN:A; 6HEP:A; 6HEP:B; 6HEP:C; 6HEP:D\tGO:0005737; GO:0005829; GO:0070062; GO:0005925; GO:0042470; GO:0016020; GO:0005739; GO:0005634; GO:0048471; GO:0017053; GO:0005774; GO:0045296; GO:0019899; GO:0042826; GO:0042802; GO:0051219; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0035329; GO:0000165; GO:0061024; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:1900740; GO:0051291; GO:0006605; GO:0043488; GO:0016032\tS34755\t601289\t\tENSG00000166913\tENST00000353703; ENST00000372839\tENSP00000300161; ENSP00000361930\tNX_P31946\t113361\t9606.ENSP00000361930\thsa:7529\r\n+P62258\t1433E_HUMAN\t7531\tNP_006752.1\t374074368; 62131678; 67464424; 194379794; 221045758; 5803225; 374074366; 51702210\t2BR9:A; 3UAL:A; 3UBW:A; 6EIH:A\tGO:0090724; GO:0005737; GO:0005829; GO:0070062; GO:0005925; GO:0098978; GO:0005871; GO:0042470; GO:0016020; GO:0005739; GO:0005634; GO:0045296; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0023026; GO:0051219; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0003723; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0097711; GO:0000086; GO:0035329; GO:0021766; GO:0035556; GO:0000165; GO:0061024; GO:0086013; GO:1905913; GO:1901020; GO:0043154; GO:1902309; GO:0001764; GO:0046827; GO:1900740; GO:0034504; GO:0006605; GO:1900034; GO:0051480; GO:0010389; GO:0086091; GO:0003064; GO:0060306; GO:0099072; GO:1901016; GO:0021762; GO:0016032\tA61235; I38947\t605066\t\tENSG00000108953; ENSG00000274474\tENST00000264335; ENST00000571732; ENST00000616643; ENST00000627231\tENSP00000264335; ENSP00000461762; ENSP00000481059; ENSP00000487356\tNX_P62258\t113363\t9606.ENSP00000264335\thsa:7531\r\n+Q04917\t1433F_HUMAN\t7533\tNP_003396.1\t4507951; 437363; 83754686; 83754699; 83754700; 1345593; 83754684; 83754685; 28862; 83754683\t2C63:A; 2C63:B; 2C63:C; 2C63:D; 2C74:A; 2C74:B\tGO:0005737; GO:0005829; GO:0070062; GO:0098978; GO:0014704; GO:0005739; GO:0005886; GO:0098793; GO:0003779; GO:0019899; GO:0035259; GO:0042802; GO:0005159; GO:0044325; GO:0019904; GO:0046982; GO:0017080; GO:0006713; GO:0042921; GO:0006886; GO:0086010; GO:0061024; GO:0050774; GO:1900740; GO:0045893; GO:0045664; GO:2000649; GO:0002028; GO:0048167; GO:0021762\tS34756; S38509; S38532\t113508\t\tENSG00000128245\tENST00000248975\tENSP00000248975\tNX_Q04917\t113365\t9606.ENSP00000248975\thsa:7533\r\n+P61981\t1433G_HUMAN\t7532\tNP_036611.2\t6016838; 380764684; 635576381; 82407956; 82407958; 550545213; 635576377; 380765197; 82407950; 550545214; 119592210; 1006588564; 1006588561; 635576379; 21464101; 82407952; 48428721; 5726310; 550545212; 635576378; 1006588559; 18088513; 49456805; 1006588565; 550545215; 1006588558; 49456763; 1006588562; 82407948; 82407954; 635576376; 635576380\t2B05:A; 2B05:B; 2B05:C; 2B05:D; 2B05:E; 2B05:F; 3UZD:A; 4E2E:A; 4J6S:A; 4J6S:B; 4J6S:C; 4J6S:D; 4O46:A; 4O46:B; 4O46:C; 4O46:D; 4O46:E; 4O46:F; 5D3E:A; 5D3E:B; 5D3E:E; 5D3E:F; 5D3E:I; 5D3E:J; 6A5S:A; 6A5S:B; 6A5S:D; 6A5S:G; 6BYJ:A; 6BYJ:B; 6BYJ:C; 6BYJ:D; 6BYJ:E; 6BYJ:F; 6BYL:A; 6BYL:B; 6BYL:C; 6BYL:D; 6BYL:E; 6BYL:F; 6BZD:A; 6BZD:B; 6BZD:C; 6BZD:D; 6FEL:A; 6FEL:B; 6FEL:C; 6FEL:D; 6GKF:A; 6GKF:B; 6GKF:C; 6GKF:D; 6GKF:E; 6GKF:F; 6GKF:G; 6GKF:H; 6GKG:A; 6GKG:B; 6GKG:C; 6GKG:D; 6GKG:E; 6GKG:F; 6GKG:G; 6GKG:H\tGO:0005829; GO:0070062; GO:0005925; GO:0016020; GO:0005739; GO:0098793; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0008426; GO:0030971; GO:0003723; GO:0032869; GO:0097711; GO:0000086; GO:0061024; GO:0006469; GO:1900740; GO:0006605; GO:0010389; GO:0045664; GO:0009966; GO:0048167\t\t605356; 617665\t\tENSG00'..b'9RU34_HUMAN\t\t\t545770389\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A3B3ISH9_HUMAN\t\t\t\t\t\t\t\t\tENSG00000100138\tENST00000469522\tENSP00000497320\t\t\t\t\r\n+NA\tA0A343FX81_HUMAN\t\t\t1228308400\t\tGO:0016021; GO:0005739; GO:0004129; GO:0019646\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A343GQD2_HUMAN\t\t\t1228319009\t\tGO:0016021; GO:0031966; GO:0070469; GO:0008137; GO:0006120\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A343UBE2_HUMAN\t\t\t1341385077\t\tGO:0016021; GO:0005743; GO:0045277; GO:0004129; GO:0020037; GO:0046872; GO:0009060; GO:0006119\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A1B0GW03_HUMAN\t\t\t\t\t\t\t\t\tENSG00000143850\tENST00000564627\tENSP00000490720\t\t\t\t\r\n+NA\tA0A1B0GWH1_HUMAN\t\t\t\t\tGO:0016021; GO:0005230; GO:0004888\t\t\t\tENSG00000175344\tENST00000637519\tENSP00000490924\t\t\t\t\r\n+NA\tU5L326_HUMAN\t\t\t545397061\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0A7C7H4_HUMAN\t\t\t628821518\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0A7CAH8_HUMAN\t\t\t628822831\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A186VNE1_HUMAN\t\t\t844316439\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+NA\tQ8N7Y7_HUMAN\t\t\t21757324\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0F6MY87_HUMAN\t\t\t597501044\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tL0R542_HUMAN\t\t\t440576005\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0E3DDA8_HUMAN\t\t\t631899380\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0U1RQL4_HUMAN\t\t\t\t\t\t\t\t\tENSG00000160185\tENST00000635189\tENSP00000489058\t\t\t\t\r\n+NA\tA0A2R8YCW3_HUMAN\t\t\t\t\t\t\t\t\tENSG00000130856\tENST00000645888\tENSP00000494034\t\t\t\t\r\n+NA\tA0A3B3ISV9_HUMAN\t\t\t\t\tGO:0003676\t\t\t\tENSG00000117419\tENST00000649995\tENSP00000497624\t\t\t\t\r\n+NA\tC6GLV5_HUMAN\t\t\t242381001\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tB7Z8D1_HUMAN\t\t\t221044480\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tG1EPR9_HUMAN\t\t\t341838790\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tB0LXF6_HUMAN\t\t\t166204135\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A059QUY0_HUMAN\t\t\t545755643\t\tGO:0016021; GO:0005743; GO:0055114\t\t\t\t\t\t\t\t\t\t\r\n+NA\tF1AHJ1_HUMAN\t\t\t322835725\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tF4NBX3_HUMAN\t\t\t329581895\t\tGO:0016021\t\t\t\t\t\t\t\t\t\t\r\n+NA\tM9PNN8_HUMAN\t\t\t449332030\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A059QQR4_HUMAN\t\t\t545754081\t\tGO:0016021; GO:0005739; GO:0004129; GO:0019646\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A059RDU1_HUMAN\t\t\t545762804\t\tGO:0016021; GO:0031966; GO:0070469; GO:0016651; GO:0042773\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A186VN48_HUMAN\t\t\t844316164\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0U4ARJ3_HUMAN\t\t\t972988098\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0N7A4T4_HUMAN\t\t\t723439372\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A0P0HNE9_HUMAN\t\t\t939232230\t\tGO:0016021; GO:0005886; GO:0004980\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A2U7MZA8_HUMAN\t\t\t1202137580\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A343GTV3_HUMAN\t\t\t1228320324\t\tGO:0016021; GO:0031966; GO:0070469; GO:0016651; GO:0042773\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A346LZW0_HUMAN\t\t\t1464230248\t\tGO:0016021; GO:0005743; GO:0070469; GO:0004129; GO:0020037; GO:0046872; GO:0009060; GO:0006119\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A386NC05_HUMAN\t\t\t1484127305\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A3B3IT61_HUMAN\t\t\t384096922\t\tGO:0046872\t\t\t\tENSG00000129170\tENST00000648719\tENSP00000497633\t\t\t\t\r\n+NA\tA0A3B3ISH5_HUMAN\t\t\t\t\t\t\t\t\tENSG00000187498\tENST00000649484\tENSP00000497355\t\t\t\t\r\n+NA\tA0A3B3ITT4_HUMAN\t\t\t\t\tGO:0047045; GO:0030539; GO:0061370\t\t\t\tENSG00000130948\tENST00000648799\tENSP00000498039\t\t\t\t\r\n+NA\tA0A023QXG8_HUMAN\t\t\t614528318\t\tGO:0016021; GO:0005743; GO:0055114\t\t\t\t\t\t\t\t\t\t\r\n+NA\tF8SY65_HUMAN\t\t\t338223266\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+NA\tI6NS60_HUMAN\t\t\t375174267\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tM9P9Y3_HUMAN\t\t\t429508971\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A090N8Z3_HUMAN\t\t\t51105896\t\tGO:0016021; GO:0005524; GO:0004672\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A1B0GU39_HUMAN\t\t\t\t\t\t\t\t\tENSG00000128973\tENST00000636876\tENSP00000489950\t\t\t\t\r\n+NA\tA0A1B0GUE6_HUMAN\t\t\t\t\t\t\t\t\tENSG00000267710\tENST00000593116\tENSP00000490076\t\t\t\t\r\n+NA\tE7E3U7_HUMAN\t\t\t315114574\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA4D2M2_HUMAN\t\t\t51094476\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA9X3Y2_HUMAN\t\t\t87137304\t\tGO:0016301\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A075C9B0_HUMAN\t\t\t545749586\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A059RL82_HUMAN\t\t\t545766497\t\tGO:0016021; GO:0005743; GO:0045263; GO:0015078; GO:0015986\t\t\t\t\t\t\t\t\t\t\r\n+NA\tD3U3M9_HUMAN\t\t\t224995005\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tL7WMV4_HUMAN\t\t\t443302586\t\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tL8E9R0_HUMAN\t\t\t444738033\t\t\t\t\t\t\t\t\t\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Mouse_id_mapping_09-05-2019.tsv --- a/tool-data/Mouse_id_mapping_09-05-2019.tsv Fri May 10 10:38:46 2019 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| b'@@ -1,85391 +0,0 @@\n-UniProt-AC\tUniProt-AC_reviewed\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tBioGrid\tSTRING\tKEGG\r\n-Q9CQV8\tQ9CQV8\t1433B_MOUSE\t54401\tNP_061223.2; XP_006499972.1\t1009083986; 409974018; 74219534; 31543974; 3065925; 568917832; 18202836; 74191394\t4GNT:A; 5F74:A; 5WFU:A; 5WFU:B; 5WFU:C; 5WFU:D; 5WFX:A; 5WFX:B\tGO:0005737; GO:0005829; GO:0042470; GO:0005634; GO:0048471; GO:0032991; GO:0017053; GO:0019899; GO:0042826; GO:0042802; GO:0051219; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:0051291; GO:0006605\t\t\t\tENSMUSG00000018326\tENSMUST00000018470\tENSMUSP00000018470\t207648\t10090.ENSMUSP00000018470\tmmu:54401\r\n-P62259\tP62259\t1433E_MOUSE\t22627\tNP_033562.3\t60391192; 226874906\t\tGO:0030424; GO:0090724; GO:0005737; GO:0005829; GO:0098978; GO:0005871; GO:0042470; GO:0005739; GO:0005634; GO:0005886; GO:0045202; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0051219; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0044877; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0021766; GO:0000165; GO:1905913; GO:1901020; GO:1902309; GO:0035308; GO:0001764; GO:0046827; GO:0034504; GO:0006605; GO:0051480; GO:0060306; GO:0099072; GO:1901016\tI48337\t\t\tENSMUSG00000020849\tENSMUST00000067664\tENSMUSP00000070993\t204619\t10090.ENSMUSP00000070993\tmmu:22627\r\n-P68510\tP68510\t1433F_MOUSE\t22629\tNP_035868.1\t74226056; 17976969; 1526541; 74139366; 74140682; 3335652; 55976655; 1354808; 26346472; 74214318; 148705461; 38181914; 14198255; 6756037\t5YQG:A; 5YQG:B; 5YQG:C; 5YQG:D\tGO:0005737; GO:0005829; GO:0098978; GO:0014704; GO:0005886; GO:0098793; GO:0045202; GO:0003779; GO:0019899; GO:0035259; GO:0042802; GO:0044325; GO:0019904; GO:0046982; GO:0017080; GO:0007010; GO:0006713; GO:0042921; GO:0006886; GO:0086010; GO:0043066; GO:0050774; GO:0045893; GO:0007088; GO:2000649; GO:0002028\t\t\t\tENSMUSG00000018965\tENSMUST00000019109\tENSMUSP00000019109\t204621\t10090.ENSMUSP00000019109\tmmu:22629\r\n-P61982\tP61982\t1433G_MOUSE\t22628\tNP_061359.2\t74215924; 31543976; 48428722; 3065929\t\tGO:0005829; GO:0043209; GO:0098793; GO:0045202; GO:0031982; GO:0003779; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0030971; GO:0032869; GO:0006605; GO:0045664; GO:0048167\t\t\t\tENSMUSG00000051391\tENSMUST00000055808; ENSMUST00000198270\tENSMUSP00000051223; ENSMUSP00000143631\t204620\t10090.ENSMUSP00000051223\tmmu:22628\r\n-O70456\tO70456\t1433S_MOUSE\t55948\tNP_061224.2\t148698109; 18202125; 74138801; 134023662; 338817846; 74142094; 3065927\t\tGO:0005737; GO:0005829; GO:0005576; GO:0005634; GO:0042802; GO:0051219; GO:0019904; GO:0019901; GO:0061436; GO:0008630; GO:0031424; GO:0003334; GO:0030216; GO:0043154; GO:0010839; GO:0030307; GO:0045606; GO:0046827; GO:0051726; GO:0000079; GO:0010482; GO:0001836; GO:0043588\t\t\t\tENSMUSG00000047281\tENSMUST00000057311\tENSMUSP00000050374\t207743\t10090.ENSMUSP00000050374\tmmu:55948\r\n-P68254\tP68254\t1433T_MOUSE\t22630\tNP_035869.1\t68566157; 74226957; 74204655; 6756039; 51593617; 55153870\t\tGO:0005737; GO:0005829; GO:0032991; GO:0045202; GO:0071889; GO:0042802; GO:0044325; GO:0008022; GO:0019904; GO:0047485; GO:0034766; GO:0045892; GO:0006605; GO:0007165; GO:0007264\t\t\t\tENSMUSG00000076432\tENSMUST00000103002; ENSMUST00000135088; ENSMUST00000155480\tENSMUSP00000100067; ENSMUSP00000123605; ENSMUSP00000117118\t204622\t10090.ENSMUSP00000100067\tmmu:22630\r\n-P63101\tP63101\t1433Z_MOUSE\t22631\tNP_001240734.1; NP_001240735.1; NP_035870.1; XP_011243654.1\t74147004; 29748002; 74189019; 1304166; 1841387; 59808984; 74219475; 359385696; 74216901; 52000885; 1526539; 74207182; 1711130; 755550334; 148676867; 359385698; 26350495; 6756041; 74187552\t\tGO:0031252; GO:0005829; GO:0098978; GO:0098686; GO:0042629; GO:0042470; GO:0005739; GO:0005634; GO:0048471; GO:0014069; GO:0032991; GO:0042802; GO:0044325; GO:0019904; GO:0019901; GO:0044877; GO:0008134; GO:0031625; GO:0051683; GO:0090168; GO:0002553; GO:0006605; GO:0006626; GO:0010941; GO:0090128; GO:0042493; GO:0008039\tJC5'..b'0156142\t\t\t\r\n-A0A2Z4T1W8\t\tA0A2Z4T1W8_MOUSE\t\t\t1417962601\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\r\n-A0A1B0GR24\t\tA0A1B0GR24_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000030649\tENSMUST00000209334\tENSMUSP00000147346\t\t\t\r\n-A0A1B0GR28\t\tA0A1B0GR28_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000110234\tENSMUST00000210312\tENSMUSP00000147351\t\t\t\r\n-A0A1D5RM23\t\tA0A1D5RM23_MOUSE\t\t\t\t\tGO:0005849; GO:0016787; GO:0003729; GO:0006378\t\t\t\tENSMUSG00000031754\tENSMUST00000212981\tENSMUSP00000148597\t\t\t\r\n-E0CYA5\t\tE0CYA5_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000020077\tENSMUST00000160643\tENSMUSP00000124365\t\t\t\r\n-A0A075B5S3\t\tA0A075B5S3_MOUSE\t\t\t\t\tGO:0009897; GO:0042571; GO:0003823; GO:0034987; GO:0050853; GO:0006958; GO:0042742; GO:0045087; GO:0006911; GO:0006910; GO:0050871\t\t\t\tENSMUSG00000076666\tENSMUST00000103475\tENSMUSP00000100256\t\t\t\r\n-E0CZ46\t\tE0CZ46_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000035495\tENSMUST00000129929\tENSMUSP00000125707\t\t\t\r\n-A0A286T4B5\t\tA0A286T4B5_MOUSE\t\t\t\t\tGO:0016021; GO:0005743; GO:0045277; GO:0004129; GO:0020037; GO:0046872; GO:0009060; GO:0006119\t\t\t\t\t\t\t\t\t\r\n-E0CYZ7\t\tE0CYZ7_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000022906\tENSMUST00000122870\tENSMUSP00000123736\t\t\t\r\n-E0CZ00\t\tE0CZ00_MOUSE\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000003721\tENSMUST00000159125\tENSMUSP00000123729\t\t\t\r\n-O88534\t\tO88534_MOUSE\t\t\t81861495; 3288848\t\t\t\t\t\t\t\t\t\t\t\r\n-A0A075B696\t\tA0A075B696_MOUSE\t\t\t\t\tGO:0009897; GO:0042571; GO:0003823; GO:0034987; GO:0050853; GO:0006958; GO:0042742; GO:0045087; GO:0006911; GO:0006910; GO:0050871\t\t\t\tENSMUSG00000094164\tENSMUST00000178229\tENSMUSP00000136577\t\t\t\r\n-D6RE28\t\tD6RE28_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000004359\tENSMUST00000133724\tENSMUSP00000114328\t\t\t\r\n-A0A1L1SRA9\t\tA0A1L1SRA9_MOUSE\t\t\t\t\tGO:0003824\t\t\t\tENSMUSG00000063849\tENSMUST00000216365\tENSMUSP00000149389\t\t\t\r\n-A0A1L1STC1\t\tA0A1L1STC1_MOUSE\t\t\t\t\tGO:0003676\t\t\t\tENSMUSG00000032119\tENSMUST00000214660\tENSMUSP00000150281\t\t\t\r\n-A0A1W2P7X3\t\tA0A1W2P7X3_MOUSE\t\t\t\t\tGO:0004725\t\t\t\tENSMUSG00000044573\tENSMUST00000219697\tENSMUSP00000151833\t\t\t\r\n-A0A1Y7VLD2\t\tA0A1Y7VLD2_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000021090\tENSMUST00000221360\tENSMUSP00000152125\t\t\t\r\n-A0A1Y7VNH8\t\tA0A1Y7VNH8_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000042050\tENSMUST00000222679\tENSMUSP00000152429\t\t\t\r\n-D6RFP3\t\tD6RFP3_MOUSE\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000047554\tENSMUST00000135565\tENSMUSP00000121078\t\t\t\r\n-D6RG66\t\tD6RG66_MOUSE\t\t\t\t\tGO:0034707; GO:0005254\t\t\t\tENSMUSG00000030428\tENSMUST00000153673\tENSMUSP00000115623\t\t\t\r\n-A0A0A6YXL9\t\tA0A0A6YXL9_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000026771\tENSMUST00000132827\tENSMUSP00000142047\t\t\t\r\n-B1AUB4\t\tB1AUB4_MOUSE\t\t\t\t\tGO:0005634; GO:0003700; GO:0008270; GO:0030221; GO:0030222; GO:0048821; GO:0030219\t\t\t\tENSMUSG00000031162\tENSMUST00000128449\tENSMUSP00000123620\t\t\t\r\n-A0A1B0GRI1\t\tA0A1B0GRI1_MOUSE\t\t\t\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984\t\t\t\tENSMUSG00000084262\tENSMUST00000210115\tENSMUSP00000147533\t\t\t\r\n-A2AP38\t\tA2AP38_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000023206\tENSMUST00000138856\tENSMUSP00000120539\t\t\t\r\n-F6TW36\t\tF6TW36_MOUSE\t\t\t\t\tGO:0005524\t\t\t\tENSMUSG00000021470\tENSMUST00000159957\tENSMUSP00000124912\t\t\t\r\n-F6XMH5\t\tF6XMH5_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000018548\tENSMUST00000154138\tENSMUSP00000118260\t\t\t\r\n-F6Z0L5\t\tF6Z0L5_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000090408\tENSMUST00000166353\tENSMUSP00000131993\t\t\t\r\n-F6ZZK0\t\tF6ZZK0_MOUSE\t\t\t\t\tGO:0031625; GO:0006511\t\t\t\tENSMUSG00000004364\tENSMUST00000167293\tENSMUSP00000126630\t\t\t\r\n-F6Q5V4\t\tF6Q5V4_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000023055\tENSMUST00000168112\tENSMUSP00000128307\t\t\t\r\n-F6QHF1\t\tF6QHF1_MOUSE\t\t\t\t\tGO:0042825; GO:0005524; GO:0042287; GO:0015433; GO:0046979; GO:0002479\t\t\t\tENSMUSG00000037321\tENSMUST00000171148\tENSMUSP00000130189\t\t\t\r\n-L7N254\t\tL7N254_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000079389\tENSMUST00000112779\tENSMUSP00000108399\t\t\t\r\n-E9QAY1\t\tE9QAY1_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000000916\tENSMUST00000170342\tENSMUSP00000128370\t\t\t\r\n-Q3UUP7\t\tQ3UUP7_MOUSE\t\t\t74209684\t\t\t\t\t\t\t\t\t\t\t\r\n-G3UXY7\t\tG3UXY7_MOUSE\t\t\t\t\tGO:0003824; GO:0043169; GO:0005975\t\t\t\tENSMUSG00000074264\tENSMUST00000174147\tENSMUSP00000133875\t\t\t\r\n-G3XA76\t\tG3XA76_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000032423\tENSMUST00000172508\tENSMUSP00000133292\t\t\t\r\n-E0CX76\t\tE0CX76_MOUSE\t\t\t\t\tGO:0051087\t\t\t\tENSMUSG00000049792\tENSMUST00000162953\tENSMUSP00000124861\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Mouse_id_mapping_13-06-2019.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/Mouse_id_mapping_13-06-2019.tsv Wed Jun 19 04:38:12 2019 -0400 |
| b |
| b'@@ -0,0 +1,86142 @@\n+UniProt-AC\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tBioGrid\tSTRING\tKEGG\r\n+Q9CQV8\t1433B_MOUSE\t54401\tNP_061223.2; XP_006499972.1\t1009083986; 409974018; 74219534; 31543974; 3065925; 568917832; 18202836; 74191394\t4GNT:A; 5F74:A; 5WFU:A; 5WFU:B; 5WFU:C; 5WFU:D; 5WFX:A; 5WFX:B\tGO:0005737; GO:0005829; GO:0042470; GO:0005634; GO:0048471; GO:0032991; GO:0017053; GO:0019899; GO:0042826; GO:0042802; GO:0051219; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:0051291; GO:0006605\t\t\t\tENSMUSG00000018326\tENSMUST00000018470\tENSMUSP00000018470\t207648\t10090.ENSMUSP00000018470\tmmu:54401\r\n+P62259\t1433E_MOUSE\t22627\tNP_033562.3\t60391192; 226874906\t\tGO:0030424; GO:0090724; GO:0005737; GO:0005829; GO:0098978; GO:0005871; GO:0042470; GO:0005739; GO:0005634; GO:0005886; GO:0045202; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0051219; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0044877; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0021766; GO:0000165; GO:1905913; GO:1901020; GO:1902309; GO:0035308; GO:0001764; GO:0046827; GO:0034504; GO:0006605; GO:0051480; GO:0060306; GO:0099072; GO:1901016\tI48337\t\t\tENSMUSG00000020849\tENSMUST00000067664\tENSMUSP00000070993\t204619\t10090.ENSMUSP00000070993\tmmu:22627\r\n+P68510\t1433F_MOUSE\t22629\tNP_035868.1\t74226056; 17976969; 1526541; 74139366; 74140682; 3335652; 55976655; 1354808; 26346472; 74214318; 148705461; 38181914; 14198255; 6756037\t5YQG:A; 5YQG:B; 5YQG:C; 5YQG:D\tGO:0005737; GO:0005829; GO:0014704; GO:0005886; GO:0045202; GO:0003779; GO:0019899; GO:0035259; GO:0042802; GO:0044325; GO:0019904; GO:0046982; GO:0017080; GO:0007010; GO:0006713; GO:0042921; GO:0006886; GO:0086010; GO:0043066; GO:0050774; GO:0045893; GO:0007088; GO:2000649; GO:0002028\t\t\t\tENSMUSG00000018965\tENSMUST00000019109\tENSMUSP00000019109\t204621\t10090.ENSMUSP00000019109\tmmu:22629\r\n+P61982\t1433G_MOUSE\t22628\tNP_061359.2\t74215924; 31543976; 48428722; 3065929\t\tGO:0005829; GO:0043209; GO:0098793; GO:0045202; GO:0031982; GO:0003779; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0030971; GO:0032869; GO:0006605; GO:0045664; GO:0048167\t\t\t\tENSMUSG00000051391\tENSMUST00000055808; ENSMUST00000198270\tENSMUSP00000051223; ENSMUSP00000143631\t204620\t10090.ENSMUSP00000051223\tmmu:22628\r\n+O70456\t1433S_MOUSE\t55948\tNP_061224.2\t148698109; 18202125; 74138801; 134023662; 338817846; 74142094; 3065927\t\tGO:0005737; GO:0005829; GO:0005576; GO:0005634; GO:0042802; GO:0051219; GO:0019904; GO:0019901; GO:0061436; GO:0008630; GO:0031424; GO:0003334; GO:0030216; GO:0043154; GO:0010839; GO:0030307; GO:0045606; GO:0046827; GO:0051726; GO:0000079; GO:0010482; GO:0001836; GO:0043588\t\t\t\tENSMUSG00000047281\tENSMUST00000057311\tENSMUSP00000050374\t207743\t10090.ENSMUSP00000050374\tmmu:55948\r\n+P68254\t1433T_MOUSE\t22630\tNP_035869.1\t68566157; 74226957; 74204655; 6756039; 51593617; 55153870\t\tGO:0005737; GO:0005829; GO:0032991; GO:0045202; GO:0071889; GO:0042802; GO:0044325; GO:0008022; GO:0019904; GO:0047485; GO:0034766; GO:0045892; GO:0006605; GO:0007165; GO:0007264\t\t\t\tENSMUSG00000076432\tENSMUST00000103002; ENSMUST00000135088; ENSMUST00000155480\tENSMUSP00000100067; ENSMUSP00000123605; ENSMUSP00000117118\t204622\t10090.ENSMUSP00000100067\tmmu:22630\r\n+P63101\t1433Z_MOUSE\t22631\tNP_001240734.1; NP_001240735.1; NP_035870.1; XP_011243654.1\t74147004; 29748002; 74189019; 1304166; 1841387; 59808984; 74219475; 359385696; 74216901; 52000885; 1526539; 74207182; 1711130; 755550334; 148676867; 359385698; 26350495; 6756041; 74187552\t\tGO:0031252; GO:0005829; GO:0098978; GO:0098686; GO:0042629; GO:0042470; GO:0005739; GO:0005634; GO:0048471; GO:0014069; GO:0032991; GO:0042802; GO:0044325; GO:0019904; GO:0019901; GO:0044877; GO:0008134; GO:0031625; GO:0051683; GO:0090168; GO:0002553; GO:0006605; GO:0006626; GO:0010941; GO:0090128; GO:0042493; GO:0008039\tJC5384\t\t\tENSMUSG00000022285\tENSMUST00000022894; ENSMUST00000110361; ENSMUST00000110362\tENSMUSP00'..b'496; 81877447; 26332000\t\tGO:0045095; GO:0005198\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t602615896\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t602616108\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0031175\t\t\t\tENSMUSG00000053024\tENSMUST00000188943\tENSMUSP00000139795\t\t\t\r\n+\t\t\t\t\t\tGO:0003723\t\t\t\tENSMUSG00000023495\tENSMUST00000190430\tENSMUSP00000140485\t\t\t\r\n+\t\t\t\t\t\tGO:0005783; GO:0005788; GO:0042803; GO:0044265; GO:0008203; GO:0001573; GO:0030203; GO:0031987; GO:0007042; GO:0007040; GO:0045862; GO:0007601\t\t\t\tENSMUSG00000032245\tENSMUST00000141821\tENSMUSP00000114283\t\t\t\r\n+\t\t\t\t32035095; 81912593\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81913189; 26327661\t\tGO:0046872; GO:0003676; GO:0006355\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81913417; 26354649\t\tGO:0005737; GO:0008143\t\t\t\t\t\t\t\t\t\r\n+\t\t667370\tNP_001005858.2\t146260276; 81896928; 26346108\t\tGO:0005737; GO:0005829; GO:0005739; GO:0042802; GO:0035457; GO:0051607\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81875232; 26352432\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t26384894; 81877933\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t45945611; 81879765\t\tGO:0004842\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t12861814; 81916801\t\tGO:0016021; GO:0004930\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81905467; 12851019\t\tGO:0016021\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t5821278; 81917824\t\tGO:0005615; GO:0005125; GO:0005126; GO:0051607\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSMUSG00000031022\tENSMUST00000145211\tENSMUSP00000115006\t\t\t\r\n+\t\t546840\tNP_001074741.1\t124486899\t\tGO:0016021\t\t\t\tENSMUSG00000070877\tENSMUST00000094916\tENSMUSP00000092521\t\t\t\r\n+\t\t\t\t\t\tGO:0005524; GO:0004672\t\t\t\tENSMUSG00000030890\tENSMUST00000136687\tENSMUSP00000123443\t\t\t\r\n+\t\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000095547\tENSMUST00000099049\tENSMUSP00000096648\t\t\t\r\n+\t\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000038280\tENSMUST00000144806\tENSMUSP00000116534\t\t\t\r\n+\t\t\t\t34849608; 81892565\t\tGO:0033063; GO:0005524; GO:0003677; GO:0008094; GO:0000724\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0005764; GO:0006665\t\t\t\tENSMUSG00000056370\tENSMUST00000070437\tENSMUSP00000066805\t\t\t\r\n+\t\t\t\t411340082\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t72128\tNP_001004362.2\t74201718; 140971855\t\tGO:0046872; GO:0003676; GO:0006355\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t37359934; 81864772\t\tGO:0044599\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81864796; 45724977\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81866839; 20977737\t\tGO:0016021; GO:0004984; GO:0007186\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t218775010\t\tGO:0004035\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSMUSG00000038291\tENSMUST00000177186\tENSMUSP00000134949\t\t\t\r\n+\t\t\t\t\t\tGO:0005887; GO:0004930; GO:0038023\t\t\t\tENSMUSG00000090581\tENSMUST00000176481\tENSMUSP00000135148\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSMUSG00000054611\tENSMUST00000175959\tENSMUSP00000135689\t\t\t\r\n+\t\t\t\t\t\tGO:0005887; GO:0004930; GO:0038023\t\t\t\tENSMUSG00000058685\tENSMUST00000233179\tENSMUSP00000156941\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSMUSG00000024175\tENSMUST00000235033\tENSMUSP00000157356\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSMUSG00000039456\tENSMUST00000201754\tENSMUSP00000144357\t\t\t\r\n+\t\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000001082\tENSMUST00000202378\tENSMUSP00000144117\t\t\t\r\n+\t\t\t\t\t\tGO:0003676\t\t\t\tENSMUSG00000062761\tENSMUST00000201450\tENSMUSP00000144433\t\t\t\r\n+\t\t\t\t\t\tGO:0003824; GO:0030170; GO:0009058\t\t\t\tENSMUSG00000022546\tENSMUST00000231028\tENSMUSP00000155475\t\t\t\r\n+\t\t\t\t\t\tGO:0030036; GO:0070836; GO:0097320\t\t\t\tENSMUSG00000016664\tENSMUST00000229337\tENSMUSP00000155845\t\t\t\r\n+\t\t\t\t1417963325\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t1417962557\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t1417963393\t\tGO:0016021\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81894371\t\tGO:0005524; GO:0004594; GO:0015937\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81897513; 26352818\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t12325\tNP_001034227.1; NP_848712.2\t26344219; 85362742; 75991700; 81913696\t\tGO:0005524; GO:0004683\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t18481022; 81915205\t\tGO:0016021; GO:0004984; GO:0007186\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0033181; GO:0030641\t\t\t\tENSMUSG00000078958\tENSMUST00000182446\tENSMUSP00000138791\t\t\t\r\n+\t\t\t\t2613145; 15667243; 81882312\t\tGO:0003854; GO:0016853; GO:0006694\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t807782560\t\tGO:0016021\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\t\t\t\t\tENSMUSG00000032776\tENSMUST00000205410\tENSMUSP00000145571\t\t\t\r\n+\t\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000056091\tENSMUST00000188366\tENSMUSP00000145599\t\t\t\r\n+\t\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000061577\tENSMUST00000153448\tENSMUSP00000122780\t\t\t\r\n+\t\t\t\t\t\tGO:0005680\t\t\t\tENSMUSG00000029472\tENSMUST00000196423\tENSMUSP00000143169\t\t\t\r\n+\t\t\t\t\t\tGO:0070682\t\t\t\tENSMUSG00000029440\tENSMUST00000197809\tENSMUSP00000143635\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Mouse_id_mapping_27-05-2019.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/Mouse_id_mapping_27-05-2019.tsv Wed Jun 19 04:38:12 2019 -0400 |
| b |
| b'@@ -0,0 +1,85391 @@\n+UniProt-AC\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tBioGrid\tSTRING\tKEGG\r\n+Q9CQV8\t1433B_MOUSE\t54401\tNP_061223.2; XP_006499972.1\t1009083986; 409974018; 74219534; 31543974; 3065925; 568917832; 18202836; 74191394\t4GNT:A; 5F74:A; 5WFU:A; 5WFU:B; 5WFU:C; 5WFU:D; 5WFX:A; 5WFX:B\tGO:0005737; GO:0005829; GO:0042470; GO:0005634; GO:0048471; GO:0032991; GO:0017053; GO:0019899; GO:0042826; GO:0042802; GO:0051219; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:0051291; GO:0006605\t\t\t\tENSMUSG00000018326\tENSMUST00000018470\tENSMUSP00000018470\t207648\t10090.ENSMUSP00000018470\tmmu:54401\r\n+P62259\t1433E_MOUSE\t22627\tNP_033562.3\t60391192; 226874906\t\tGO:0030424; GO:0090724; GO:0005737; GO:0005829; GO:0098978; GO:0005871; GO:0042470; GO:0005739; GO:0005634; GO:0005886; GO:0045202; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0051219; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0044877; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0021766; GO:0000165; GO:1905913; GO:1901020; GO:1902309; GO:0035308; GO:0001764; GO:0046827; GO:0034504; GO:0006605; GO:0051480; GO:0060306; GO:0099072; GO:1901016\tI48337\t\t\tENSMUSG00000020849\tENSMUST00000067664\tENSMUSP00000070993\t204619\t10090.ENSMUSP00000070993\tmmu:22627\r\n+P68510\t1433F_MOUSE\t22629\tNP_035868.1\t74226056; 17976969; 1526541; 74139366; 74140682; 3335652; 55976655; 1354808; 26346472; 74214318; 148705461; 38181914; 14198255; 6756037\t5YQG:A; 5YQG:B; 5YQG:C; 5YQG:D\tGO:0005737; GO:0005829; GO:0098978; GO:0014704; GO:0005886; GO:0098793; GO:0045202; GO:0003779; GO:0019899; GO:0035259; GO:0042802; GO:0044325; GO:0019904; GO:0046982; GO:0017080; GO:0007010; GO:0006713; GO:0042921; GO:0006886; GO:0086010; GO:0043066; GO:0050774; GO:0045893; GO:0007088; GO:2000649; GO:0002028\t\t\t\tENSMUSG00000018965\tENSMUST00000019109\tENSMUSP00000019109\t204621\t10090.ENSMUSP00000019109\tmmu:22629\r\n+P61982\t1433G_MOUSE\t22628\tNP_061359.2\t74215924; 31543976; 48428722; 3065929\t\tGO:0005829; GO:0043209; GO:0098793; GO:0045202; GO:0031982; GO:0003779; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0030971; GO:0032869; GO:0006605; GO:0045664; GO:0048167\t\t\t\tENSMUSG00000051391\tENSMUST00000055808; ENSMUST00000198270\tENSMUSP00000051223; ENSMUSP00000143631\t204620\t10090.ENSMUSP00000051223\tmmu:22628\r\n+O70456\t1433S_MOUSE\t55948\tNP_061224.2\t148698109; 18202125; 74138801; 134023662; 338817846; 74142094; 3065927\t\tGO:0005737; GO:0005829; GO:0005576; GO:0005634; GO:0042802; GO:0051219; GO:0019904; GO:0019901; GO:0061436; GO:0008630; GO:0031424; GO:0003334; GO:0030216; GO:0043154; GO:0010839; GO:0030307; GO:0045606; GO:0046827; GO:0051726; GO:0000079; GO:0010482; GO:0001836; GO:0043588\t\t\t\tENSMUSG00000047281\tENSMUST00000057311\tENSMUSP00000050374\t207743\t10090.ENSMUSP00000050374\tmmu:55948\r\n+P68254\t1433T_MOUSE\t22630\tNP_035869.1\t68566157; 74226957; 74204655; 6756039; 51593617; 55153870\t\tGO:0005737; GO:0005829; GO:0032991; GO:0045202; GO:0071889; GO:0042802; GO:0044325; GO:0008022; GO:0019904; GO:0047485; GO:0034766; GO:0045892; GO:0006605; GO:0007165; GO:0007264\t\t\t\tENSMUSG00000076432\tENSMUST00000103002; ENSMUST00000135088; ENSMUST00000155480\tENSMUSP00000100067; ENSMUSP00000123605; ENSMUSP00000117118\t204622\t10090.ENSMUSP00000100067\tmmu:22630\r\n+P63101\t1433Z_MOUSE\t22631\tNP_001240734.1; NP_001240735.1; NP_035870.1; XP_011243654.1\t74147004; 29748002; 74189019; 1304166; 1841387; 59808984; 74219475; 359385696; 74216901; 52000885; 1526539; 74207182; 1711130; 755550334; 148676867; 359385698; 26350495; 6756041; 74187552\t\tGO:0031252; GO:0005829; GO:0098978; GO:0098686; GO:0042629; GO:0042470; GO:0005739; GO:0005634; GO:0048471; GO:0014069; GO:0032991; GO:0042802; GO:0044325; GO:0019904; GO:0019901; GO:0044877; GO:0008134; GO:0031625; GO:0051683; GO:0090168; GO:0002553; GO:0006605; GO:0006626; GO:0010941; GO:0090128; GO:0042493; GO:0008039\tJC5384\t\t\tENSMUSG00000022285\tENSMUST00000022894; ENSMUST00000110361; ENSM'..b'6\t\t\t\tENSMUSG00000020630\tENSMUST00000223322\tENSMUSP00000152845\t\t\t\r\n+NA\tA0A2Z4T2H6_MOUSE\t\t\t1417962981\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A338P6X4_MOUSE\t\t\t\t\tGO:0005524; GO:0046872; GO:0004637; GO:0009113\t\t\t\tENSMUSG00000022962\tENSMUST00000232367\tENSMUSP00000156142\t\t\t\r\n+NA\tA0A2Z4T1W8_MOUSE\t\t\t1417962601\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A1B0GR24_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000030649\tENSMUST00000209334\tENSMUSP00000147346\t\t\t\r\n+NA\tA0A1B0GR28_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000110234\tENSMUST00000210312\tENSMUSP00000147351\t\t\t\r\n+NA\tA0A1D5RM23_MOUSE\t\t\t\t\tGO:0005849; GO:0016787; GO:0003729; GO:0006378\t\t\t\tENSMUSG00000031754\tENSMUST00000212981\tENSMUSP00000148597\t\t\t\r\n+NA\tE0CYA5_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000020077\tENSMUST00000160643\tENSMUSP00000124365\t\t\t\r\n+NA\tA0A075B5S3_MOUSE\t\t\t\t\tGO:0009897; GO:0042571; GO:0003823; GO:0034987; GO:0050853; GO:0006958; GO:0042742; GO:0045087; GO:0006911; GO:0006910; GO:0050871\t\t\t\tENSMUSG00000076666\tENSMUST00000103475\tENSMUSP00000100256\t\t\t\r\n+NA\tE0CZ46_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000035495\tENSMUST00000129929\tENSMUSP00000125707\t\t\t\r\n+NA\tA0A286T4B5_MOUSE\t\t\t\t\tGO:0016021; GO:0005743; GO:0045277; GO:0004129; GO:0020037; GO:0046872; GO:0009060; GO:0006119\t\t\t\t\t\t\t\t\t\r\n+NA\tE0CYZ7_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000022906\tENSMUST00000122870\tENSMUSP00000123736\t\t\t\r\n+NA\tE0CZ00_MOUSE\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000003721\tENSMUST00000159125\tENSMUSP00000123729\t\t\t\r\n+NA\tO88534_MOUSE\t\t\t81861495; 3288848\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tA0A075B696_MOUSE\t\t\t\t\tGO:0009897; GO:0042571; GO:0003823; GO:0034987; GO:0050853; GO:0006958; GO:0042742; GO:0045087; GO:0006911; GO:0006910; GO:0050871\t\t\t\tENSMUSG00000094164\tENSMUST00000178229\tENSMUSP00000136577\t\t\t\r\n+NA\tD6RE28_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000004359\tENSMUST00000133724\tENSMUSP00000114328\t\t\t\r\n+NA\tA0A1L1SRA9_MOUSE\t\t\t\t\tGO:0003824\t\t\t\tENSMUSG00000063849\tENSMUST00000216365\tENSMUSP00000149389\t\t\t\r\n+NA\tA0A1L1STC1_MOUSE\t\t\t\t\tGO:0003676\t\t\t\tENSMUSG00000032119\tENSMUST00000214660\tENSMUSP00000150281\t\t\t\r\n+NA\tA0A1W2P7X3_MOUSE\t\t\t\t\tGO:0004725\t\t\t\tENSMUSG00000044573\tENSMUST00000219697\tENSMUSP00000151833\t\t\t\r\n+NA\tA0A1Y7VLD2_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000021090\tENSMUST00000221360\tENSMUSP00000152125\t\t\t\r\n+NA\tA0A1Y7VNH8_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000042050\tENSMUST00000222679\tENSMUSP00000152429\t\t\t\r\n+NA\tD6RFP3_MOUSE\t\t\t\t\tGO:0016021\t\t\t\tENSMUSG00000047554\tENSMUST00000135565\tENSMUSP00000121078\t\t\t\r\n+NA\tD6RG66_MOUSE\t\t\t\t\tGO:0034707; GO:0005254\t\t\t\tENSMUSG00000030428\tENSMUST00000153673\tENSMUSP00000115623\t\t\t\r\n+NA\tA0A0A6YXL9_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000026771\tENSMUST00000132827\tENSMUSP00000142047\t\t\t\r\n+NA\tB1AUB4_MOUSE\t\t\t\t\tGO:0005634; GO:0003700; GO:0008270; GO:0030221; GO:0030222; GO:0048821; GO:0030219\t\t\t\tENSMUSG00000031162\tENSMUST00000128449\tENSMUSP00000123620\t\t\t\r\n+NA\tA0A1B0GRI1_MOUSE\t\t\t\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984\t\t\t\tENSMUSG00000084262\tENSMUST00000210115\tENSMUSP00000147533\t\t\t\r\n+NA\tA2AP38_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000023206\tENSMUST00000138856\tENSMUSP00000120539\t\t\t\r\n+NA\tF6TW36_MOUSE\t\t\t\t\tGO:0005524\t\t\t\tENSMUSG00000021470\tENSMUST00000159957\tENSMUSP00000124912\t\t\t\r\n+NA\tF6XMH5_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000018548\tENSMUST00000154138\tENSMUSP00000118260\t\t\t\r\n+NA\tF6Z0L5_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000090408\tENSMUST00000166353\tENSMUSP00000131993\t\t\t\r\n+NA\tF6ZZK0_MOUSE\t\t\t\t\tGO:0031625; GO:0006511\t\t\t\tENSMUSG00000004364\tENSMUST00000167293\tENSMUSP00000126630\t\t\t\r\n+NA\tF6Q5V4_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000023055\tENSMUST00000168112\tENSMUSP00000128307\t\t\t\r\n+NA\tF6QHF1_MOUSE\t\t\t\t\tGO:0042825; GO:0005524; GO:0042287; GO:0015433; GO:0046979; GO:0002479\t\t\t\tENSMUSG00000037321\tENSMUST00000171148\tENSMUSP00000130189\t\t\t\r\n+NA\tL7N254_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000079389\tENSMUST00000112779\tENSMUSP00000108399\t\t\t\r\n+NA\tE9QAY1_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000000916\tENSMUST00000170342\tENSMUSP00000128370\t\t\t\r\n+NA\tQ3UUP7_MOUSE\t\t\t74209684\t\t\t\t\t\t\t\t\t\t\t\r\n+NA\tG3UXY7_MOUSE\t\t\t\t\tGO:0003824; GO:0043169; GO:0005975\t\t\t\tENSMUSG00000074264\tENSMUST00000174147\tENSMUSP00000133875\t\t\t\r\n+NA\tG3XA76_MOUSE\t\t\t\t\t\t\t\t\tENSMUSG00000032423\tENSMUST00000172508\tENSMUSP00000133292\t\t\t\r\n+NA\tE0CX76_MOUSE\t\t\t\t\tGO:0051087\t\t\t\tENSMUSG00000049792\tENSMUST00000162953\tENSMUSP00000124861\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Rat_id_mapping_09-05-2019.tsv --- a/tool-data/Rat_id_mapping_09-05-2019.tsv Fri May 10 10:38:46 2019 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| b'@@ -1,36108 +0,0 @@\n-UniProt-AC\tUniProt-AC_reviewed\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tBioGrid\tSTRING\tKEGG\r\n-P35213\tP35213\t1433B_RAT\t56011\tNP_062250.1\t1911805; 265428; 49904289; 9507243; 1345591; 149042981; 402524\t\tGO:0005737; GO:0005829; GO:0042470; GO:0005634; GO:0048471; GO:0032991; GO:0017053; GO:0042826; GO:0042802; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:0051291; GO:0006605\tA49023\t\t\tENSRNOG00000010945\tENSRNOT00000016981\tENSRNOP00000016981\t248554\t10116.ENSRNOP00000016981\trno:56011\r\n-P62260\tP62260\t1433E_RAT\t29753\tNP_113791.1\t487918; 149053422; 38648857; 13928824; 1469948; 61216932; 294504\t\tGO:0030424; GO:0090724; GO:0005737; GO:0005829; GO:0098978; GO:0005871; GO:0042470; GO:0005634; GO:0005886; GO:0045202; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0008426; GO:0044877; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0021766; GO:0000165; GO:1905913; GO:1901020; GO:1902309; GO:0001764; GO:0046827; GO:0034504; GO:0006605; GO:0051480; GO:0060306; GO:0099072; GO:1901016; GO:0007165\tJX0341\t\t\tENSRNOG00000005290\tENSRNOT00000007100\tENSRNOP00000007100\t248364\t10116.ENSRNOP00000007100\trno:29753\r\n-P68511\tP68511\t1433F_RAT\t25576\tNP_037184.1\t51858611; 398155; 6981710; 55976637; 149047466\t\tGO:0005737; GO:0045202; GO:0019904; GO:0017080; GO:0086010; GO:2000649; GO:0002028\tA60031\t\t\tENSRNOG00000055471\tENSRNOT00000085735\tENSRNOP00000075701\t247607\t10116.ENSRNOP00000024388\trno:25576\r\n-P61983\tP61983\t1433G_RAT\t56010\tNP_062249.1; XP_006249246.2\t149063017; 402526; 48428718; 117558830; 265430; 1046854730; 9507245\t\tGO:0005737; GO:0098793; GO:0045202; GO:0031982; GO:0003779; GO:0030234; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0030971; GO:0032869; GO:0006605; GO:0045664; GO:0048167; GO:0007165\tB49023\t\t\tENSRNOG00000001436\tENSRNOT00000001954; ENSRNOT00000084730\tENSRNOP00000001954; ENSRNOP00000069671\t248553\t10116.ENSRNOP00000001954\trno:56010\r\n-P68255\tP68255\t1433T_RAT\t25577\tNP_037185.1\t402509; 149051000; 61216933; 6981712; 38383130\t\tGO:0005737; GO:0032991; GO:0045202; GO:0071889; GO:0042802; GO:0044325; GO:0008022; GO:0019904; GO:0047485; GO:0034766; GO:0045892; GO:0006605; GO:0007264\tI52647\t\t\tENSRNOG00000051650\tENSRNOT00000077786\tENSRNOP00000072011\t247608\t10116.ENSRNOP00000011501\trno:25577\r\n-P63102\tP63102\t1433Z_RAT\t25578\tNP_037143.2; XP_006241591.1\t62871703; 294506; 564359766; 62990183; 402511; 52000883; 68085421; 487920; 149066515; 1051270\t\tGO:0031252; GO:0042629; GO:0042470; GO:0005739; GO:0048471; GO:0014069; GO:0032991; GO:0019904; GO:0044877; GO:0002553; GO:0006626; GO:0042493\tJC2502; JC5232; S59915\t\t\tENSRNOG00000008195\tENSRNOT00000035628\tENSRNOP00000030885\t247609\t10116.ENSRNOP00000030885\trno:25578\r\n-P22282\tP22282\t22P1_RAT\t25030\tNP_036850.1\t112720; 205903; 7549742; 299360; 260883; 530167\t\tGO:0005829; GO:0005634; GO:0004869; GO:0030521\tA49304\t\t\t\t\t\t\t10116.ENSRNOP00000040184\trno:25030\r\n-P22283\tP22283\t22P2_RAT\t296229\tNP_954887.1\t41152508; 112721; 205905; 149041137; 56013; 72679563\t\tGO:0004869\tJT0616\t\t\t\t\t\t\t10116.ENSRNOP00000043921\trno:296229\r\n-Q80W83\tQ80W83\t2A5B_RAT\t309179\tNP_852044.1; XP_008758365.1\t31077118; 672039381; 81873316; 149062165; 60422755; 30575399\t\tGO:0005829; GO:0005634; GO:0000159; GO:0072542; GO:0071363; GO:0070317; GO:0071158; GO:0051091; GO:0010976; GO:0051388; GO:0031334; GO:0045944; GO:0006470; GO:0050730; GO:0031952; GO:0001932; GO:0010469; GO:0007165\t\t\t\tENSRNOG00000021025\tENSRNOT00000028542\tENSRNOP00000028542\t\t10116.ENSRNOP00000065720\trno:309179\r\n-Q4QQT4\tQ4QQT4\t2AAB_RAT\t315648\tNP_001020589.1\t81918149; 70794752; 67678118\t\tGO:0005737; GO:0045121; GO:0000159; GO:0019888; GO:0060561; GO:2001241; GO:0006470\t\t\t\tENSRNOG00000010922\tENSRNOT00000064290\tENSRNOP00000059428\t261094\t10116.ENSRNOP00000059428\trno:315648\r\n-P36876\tP36876\t2ABA_RAT\t117104\tNP_446451.1\t2346992; 206297; 206299; 16758910; 118764362; 543717; 149030346\t\tGO:000582'..b'SRNOP00000063466\t\t\t\r\n-D3Z9C7\t\tD3Z9C7_RAT\t\t\t\t\tGO:0048786; GO:0007416\t\t\t\tENSRNOG00000005726\tENSRNOT00000008637\tENSRNOP00000008637\t\t\t\r\n-D3ZM01\t\tD3ZM01_RAT\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSRNOG00000029835\tENSRNOT00000040565\tENSRNOP00000041458\t\t10116.ENSRNOP00000041458\t\r\n-A0A0G2JT64\t\tA0A0G2JT64_RAT\t\t\t\t\tGO:0005829; GO:0005739; GO:0008106; GO:0004032; GO:0070401; GO:0052650; GO:0070402; GO:0016491; GO:0016918; GO:0019751; GO:0042574; GO:0042572\t\t\t\tENSRNOG00000009734\tENSRNOT00000078996\tENSRNOP00000068585\t\t\t\r\n-A0A0G2K375\t\tA0A0G2K375_RAT\t\t\t\t\tGO:0071013; GO:1990726; GO:0000932; GO:0046540; GO:0005688; GO:0006397\t\t\t\tENSRNOG00000011065\tENSRNOT00000014753\tENSRNOP00000072528\t\t\t\r\n-M0R6W4\t\tM0R6W4_RAT\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSRNOG00000047774\tENSRNOT00000075169\tENSRNOP00000065173\t\t10116.ENSRNOP00000065173\t\r\n-Q63329\t\tQ63329_RAT\t\t\t81863292; 205302\t\t\tI52083\t\t\t\t\t\t\t\t\r\n-A0A0G2KA87\t\tA0A0G2KA87_RAT\t\t\t\t\tGO:0016021\t\t\t\tENSRNOG00000059973\tENSRNOT00000089152\tENSRNOP00000075304\t\t\t\r\n-A0A0G2K0W0\t\tA0A0G2K0W0_RAT\t\t\t\t\tGO:0016740; GO:0008299\t\t\t\tENSRNOG00000016767\tENSRNOT00000090387\tENSRNOP00000071601\t\t\t\r\n-A0A0G2K7Q4\t\tA0A0G2K7Q4_RAT\t\t\t\t\tGO:0000790; GO:0005667; GO:0003680; GO:0001228; GO:0070888; GO:0046982; GO:0042803; GO:0008134; GO:0007512; GO:0003278; GO:0003253; GO:0003219; GO:0060536; GO:0061325; GO:0060982; GO:0042733; GO:0001947; GO:0001701; GO:0010463; GO:0010667; GO:0043392; GO:0043433; GO:0010629; GO:0045668; GO:0042475; GO:0048935; GO:0010613; GO:0070374; GO:1900745; GO:2000764; GO:2000763; GO:2000679; GO:1903929; GO:0003266; GO:0034103; GO:0001967; GO:0048485; GO:0048538; GO:0043586; GO:0061032\t\t\t\tENSRNOG00000060448\tENSRNOT00000079552\tENSRNOP00000074299\t\t\t\r\n-A0A0G2KB77\t\tA0A0G2KB77_RAT\t\t\t\t\tGO:0022625; GO:0003735; GO:0002181\t\t\t\tENSRNOG00000022022\tENSRNOT00000030173\tENSRNOP00000075685\t\t\t\r\n-A0A0G2JUD5\t\tA0A0G2JUD5_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000058517\tENSRNOT00000087468\tENSRNOP00000069056\t\t\t\r\n-A0A0G2K023\t\tA0A0G2K023_RAT\t\t\t\t\tGO:0005604; GO:0014002; GO:0000904; GO:0060041; GO:0007601\t\t\t\tENSRNOG00000059507\tENSRNOT00000090137\tENSRNOP00000071272\t\t10116.ENSRNOP00000013172\t\r\n-A0A0G2K1D1\t\tA0A0G2K1D1_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000056854\tENSRNOT00000084127\tENSRNOP00000071794\t\t\t\r\n-A0A0H2UHJ2\t\tA0A0H2UHJ2_RAT\t\t\t\t\tGO:0005654; GO:0051726\t\t\t\tENSRNOG00000011379\tENSRNOT00000015472\tENSRNOP00000015472\t\t\t\r\n-A0A140GE10\t\tA0A140GE10_RAT\t\t\t1002159869\t\tGO:0016021; GO:0005743; GO:0045275; GO:0046872; GO:0008121; GO:0006122\t\t\t\t\t\t\t\t\t\r\n-D3ZDY2\t\tD3ZDY2_RAT\t\t\t\t\tGO:0005524; GO:0004672\t\t\t\tENSRNOG00000025037\tENSRNOT00000068040\tENSRNOP00000062510\t\t10116.ENSRNOP00000062510\t\r\n-F1LUG5\t\tF1LUG5_RAT\t\t\t\t\tGO:0016021\t\t\t\tENSRNOG00000004032\tENSRNOT00000005684\tENSRNOP00000005684\t\t10116.ENSRNOP00000005684\t\r\n-F1LNL5\t\tF1LNL5_RAT\t\t\t\t\tGO:0005912; GO:0031463; GO:0005737; GO:0030057; GO:0045109; GO:0051865; GO:2000312\t\t\t\tENSRNOG00000033372\tENSRNOT00000052120\tENSRNOP00000050815\t\t\t\r\n-F1LUQ9\t\tF1LUQ9_RAT\t\t\t\t\tGO:0005634; GO:0016538; GO:0006357\t\t\t\tENSRNOG00000038481\tENSRNOT00000058643\tENSRNOP00000055438\t\t10116.ENSRNOP00000055438\t\r\n-A0A1W2Q6P1\t\tA0A1W2Q6P1_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000006498\tENSRNOT00000093515\tENSRNOP00000076349\t\t\t\r\n-D3Z9R6\t\tD3Z9R6_RAT\t\t\t\t\tGO:0009897; GO:0016021; GO:0005102; GO:0050776; GO:0050852\t\t\t\tENSRNOG00000000335\tENSRNOT00000039305\tENSRNOP00000034890\t\t10116.ENSRNOP00000034890\t\r\n-D3ZBP7\t\tD3ZBP7_RAT\t\t\t\t\tGO:0005783; GO:0008422; GO:0005975\t\t\t\tENSRNOG00000009193\tENSRNOT00000012308\tENSRNOP00000012308\t\t\t\r\n-D3ZJX6\t\tD3ZJX6_RAT\t\t\t\t\tGO:0020037; GO:0005506; GO:0016705\t\t\t\tENSRNOG00000009597\tENSRNOT00000057095\tENSRNOP00000053925\t\t\t\r\n-A0A0G2JWD2\t\tA0A0G2JWD2_RAT\t\t\t\t\tGO:0030424; GO:0043034; GO:0005829; GO:0043197; GO:0098978; GO:0005634; GO:0048471; GO:0005844; GO:0035770; GO:0003729; GO:0046982; GO:0042803; GO:0033592; GO:0007517; GO:2000637; GO:0006417\t\t\t\tENSRNOG00000051480\tENSRNOT00000088442\tENSRNOP00000069834\t\t\t\r\n-A0A0G2K206\t\tA0A0G2K206_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000031483\tENSRNOT00000043247\tENSRNOP00000072058\t\t\t\r\n-E9PTU6\t\tE9PTU6_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000011997\tENSRNOT00000015975\tENSRNOP00000015975\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Rat_id_mapping_13-06-2019.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/Rat_id_mapping_13-06-2019.tsv Wed Jun 19 04:38:12 2019 -0400 |
| b |
| b'@@ -0,0 +1,36111 @@\n+UniProt-AC\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tBioGrid\tSTRING\tKEGG\r\n+P35213\t1433B_RAT\t56011\tNP_062250.1\t1911805; 265428; 49904289; 9507243; 1345591; 149042981; 402524\t\tGO:0005737; GO:0005829; GO:0042470; GO:0005634; GO:0048471; GO:0032991; GO:0017053; GO:0042826; GO:0042802; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:0051291; GO:0006605\tA49023\t\t\tENSRNOG00000010945\tENSRNOT00000016981\tENSRNOP00000016981\t248554\t10116.ENSRNOP00000016981\trno:56011\r\n+P62260\t1433E_RAT\t29753\tNP_113791.1\t487918; 149053422; 38648857; 13928824; 1469948; 61216932; 294504\t\tGO:0030424; GO:0090724; GO:0005737; GO:0005829; GO:0098978; GO:0005871; GO:0042470; GO:0005634; GO:0005886; GO:0045202; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0008426; GO:0044877; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0021766; GO:0000165; GO:1905913; GO:1901020; GO:1902309; GO:0001764; GO:0046827; GO:0034504; GO:0006605; GO:0051480; GO:0060306; GO:0099072; GO:1901016; GO:0007165\tJX0341\t\t\tENSRNOG00000005290\tENSRNOT00000007100\tENSRNOP00000007100\t248364\t10116.ENSRNOP00000007100\trno:29753\r\n+P68511\t1433F_RAT\t25576\tNP_037184.1\t51858611; 398155; 6981710; 55976637; 149047466\t\tGO:0005737; GO:0045202; GO:0019904; GO:0017080; GO:0086010; GO:2000649; GO:0002028\tA60031\t\t\tENSRNOG00000055471\tENSRNOT00000085735\tENSRNOP00000075701\t247607\t10116.ENSRNOP00000024388\trno:25576\r\n+P61983\t1433G_RAT\t56010\tNP_062249.1; XP_006249246.2\t149063017; 402526; 48428718; 117558830; 265430; 1046854730; 9507245\t\tGO:0005737; GO:0098793; GO:0045202; GO:0031982; GO:0003779; GO:0030234; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0030971; GO:0032869; GO:0006605; GO:0045664; GO:0048167; GO:0007165\tB49023\t\t\tENSRNOG00000001436\tENSRNOT00000001954; ENSRNOT00000084730\tENSRNOP00000001954; ENSRNOP00000069671\t248553\t10116.ENSRNOP00000001954\trno:56010\r\n+P68255\t1433T_RAT\t25577\tNP_037185.1\t402509; 149051000; 61216933; 6981712; 38383130\t\tGO:0005737; GO:0032991; GO:0045202; GO:0071889; GO:0042802; GO:0044325; GO:0008022; GO:0019904; GO:0047485; GO:0034766; GO:0045892; GO:0006605; GO:0007264\tI52647\t\t\tENSRNOG00000051650\tENSRNOT00000077786\tENSRNOP00000072011\t247608\t10116.ENSRNOP00000011501\trno:25577\r\n+P63102\t1433Z_RAT\t25578\tNP_037143.2; XP_006241591.1\t62871703; 294506; 564359766; 62990183; 402511; 52000883; 68085421; 487920; 149066515; 1051270\t\tGO:0031252; GO:0042629; GO:0042470; GO:0005739; GO:0048471; GO:0014069; GO:0032991; GO:0019904; GO:0044877; GO:0002553; GO:0006626; GO:0042493\tJC2502; JC5232; S59915\t\t\tENSRNOG00000008195\tENSRNOT00000035628\tENSRNOP00000030885\t247609\t10116.ENSRNOP00000030885\trno:25578\r\n+P22282\t22P1_RAT\t25030\tNP_036850.1\t112720; 205903; 7549742; 299360; 260883; 530167\t\tGO:0005829; GO:0005634; GO:0004869; GO:0030521\tA49304\t\t\t\t\t\t\t10116.ENSRNOP00000040184\trno:25030\r\n+P22283\t22P2_RAT\t296229\tNP_954887.1\t41152508; 112721; 205905; 149041137; 56013; 72679563\t\tGO:0004869\tJT0616\t\t\t\t\t\t\t10116.ENSRNOP00000043921\trno:296229\r\n+Q80W83\t2A5B_RAT\t309179\tNP_852044.1; XP_008758365.1\t31077118; 672039381; 81873316; 149062165; 60422755; 30575399\t\tGO:0005829; GO:0005634; GO:0000159; GO:0072542; GO:0071363; GO:0070317; GO:0071158; GO:0051091; GO:0010976; GO:0051388; GO:0031334; GO:0045944; GO:0006470; GO:0050730; GO:0031952; GO:0001932; GO:0010469; GO:0007165\t\t\t\tENSRNOG00000021025\tENSRNOT00000028542\tENSRNOP00000028542\t\t10116.ENSRNOP00000065720\trno:309179\r\n+Q4QQT4\t2AAB_RAT\t315648\tNP_001020589.1\t81918149; 70794752; 67678118\t\tGO:0005737; GO:0045121; GO:0000159; GO:0019888; GO:0060561; GO:2001241; GO:0006470\t\t\t\tENSRNOG00000010922\tENSRNOT00000064290\tENSRNOP00000059428\t261094\t10116.ENSRNOP00000059428\trno:315648\r\n+P36876\t2ABA_RAT\t117104\tNP_446451.1\t2346992; 206297; 206299; 16758910; 118764362; 543717; 149030346\t\tGO:0005829; GO:0098978; GO:0000159; GO:0051721; GO:0019888; GO:0004722; GO:0044877; GO:0048156; GO:0000278'..b'\t\t404833\tNP_001000640.1\t47577645\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984; GO:0007186\t\t\t\tENSRNOG00000054715\tENSRNOT00000078540\tENSRNOP00000072963\t\t\t\r\n+\t\t\t\t\t\tGO:0003723\t\t\t\tENSRNOG00000052811\tENSRNOT00000085520\tENSRNOP00000073452\t\t\t\r\n+\t\t362304\tXP_006236009.1\t564345385\t\tGO:0005829; GO:0005664; GO:0003688; GO:0006270\t\t\t\tENSRNOG00000011519\tENSRNOT00000090600\tENSRNOP00000073770\t\t\t\r\n+\t\t\t\t\t\tGO:0003842; GO:0016620; GO:0010133\t\t\t\tENSRNOG00000061876\tENSRNOT00000088766\tENSRNOP00000075011\t\t\t\r\n+\t\t\t\t151505285\t\tGO:0016021; GO:0005227; GO:0016048; GO:0050951\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81903480; 13649416\t\tGO:0042613; GO:0019882; GO:0006955\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81868562; 9309429\t\t\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t\t\tGO:0000177; GO:0000178; GO:0000176; GO:0005730; GO:0005654; GO:0035327; GO:0003723; GO:0071034; GO:0045006; GO:0043928; GO:0000467; GO:0071035; GO:0071038; GO:0071049; GO:0034427; GO:0071051; GO:0034475\t\t\t\tENSRNOG00000012409\tENSRNOT00000016582\tENSRNOP00000016582\t\t\t\r\n+\t\t685723\tNP_001178010.1\t300797452\t\tGO:0005509; GO:0000287\t\t\t\tENSRNOG00000014600\tENSRNOT00000019578\tENSRNOP00000019578\t\t\t\r\n+\t\t116487\tNP_446254.1\t281332117\t\tGO:0005604; GO:0031012; GO:0005615; GO:0005802; GO:0050839; GO:0005518; GO:0050840; GO:0005178; GO:0001525; GO:0007155; GO:0008283; GO:0002062; GO:0030198\t\t\t\tENSRNOG00000012216\tENSRNOT00000016390\tENSRNOP00000016389\t\t\t\r\n+\t\t\t\t262968\t\tGO:0005759; GO:0003870; GO:0030170; GO:0006778\t\t\t\t\t\t\t\t\t\r\n+\t\t\t\t81917395; 10644517\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984\t\t\t\t\t\t\t\t\t\r\n+\t\t366498\tXP_001074380.1; XP_345599.3\t109475827; 109477675\t\tGO:0016021; GO:0052689\t\t\t\tENSRNOG00000042808\tENSRNOT00000068281\tENSRNOP00000062831\t\t\t\r\n+\t\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSRNOG00000032765\tENSRNOT00000046179\tENSRNOP00000041920\t\t\t\r\n+\t\t361266\tNP_001163813.1; XP_006254253.1; XP_008770095.1; XP_008770096.1\t281332197; 672082450; 672082448; 564392050\t\tGO:0005829; GO:0008106; GO:0004032; GO:0047086; GO:0016491; GO:0016229; GO:0008202\t\t\t\tENSRNOG00000050040\tENSRNOT00000029049\tENSRNOP00000037905\t\t\t\r\n+\t\t\t\t\t\tGO:0005783; GO:0016021; GO:0003841; GO:0006654\t\t\t\tENSRNOG00000000437\tENSRNOT00000088734\tENSRNOP00000070829\t\t\t\r\n+\t\t498834\tXP_006254662.1\t564393105\t\tGO:0016459; GO:0051015; GO:0005524; GO:0003774\t\t\t\tENSRNOG00000015035\tENSRNOT00000090390\tENSRNOP00000072561\t\t\t\r\n+\t\t\t\t\t\tGO:0005615; GO:0004867\t\t\t\tENSRNOG00000052294\tENSRNOT00000078633\tENSRNOP00000073710\t\t\t\r\n+\t\t\t\t\t\tGO:0005887; GO:0004930; GO:0038023\t\t\t\tENSRNOG00000047582\tENSRNOT00000086687\tENSRNOP00000069794\t\t\t\r\n+\t\t100365588\tXP_002724593.1; XP_003750973.1\t293340418; 392351577\t\tGO:0045095\t\t\t\tENSRNOG00000053283\tENSRNOT00000080171\tENSRNOP00000070461\t\t\t\r\n+\t\t294140\tNP_001000267.1\t47576601\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984\t\t\t\tENSRNOG00000053746\tENSRNOT00000089844\tENSRNOP00000070506\t\t\t\r\n+\t\t\t\t\t\tGO:0016021; GO:0004252\t\t\t\tENSRNOG00000023271\tENSRNOT00000071076\tENSRNOP00000064548\t\t\t\r\n+\t\t691368\tXP_001077914.3\t392346562\t\tGO:0016021; GO:0005886; GO:0004930; GO:0004984; GO:0007186\t\t\t\tENSRNOG00000048301\tENSRNOT00000074883\tENSRNOP00000065671\t\t\t\r\n+\t\t\t\t\t\tGO:0009897; GO:0042571; GO:0003823; GO:0034987; GO:0050853; GO:0006958; GO:0042742; GO:0045087; GO:0006911; GO:0006910; GO:0050871\t\t\t\tENSRNOG00000050708\tENSRNOT00000075707\tENSRNOP00000066273\t\t\t\r\n+\t\t\t\t\t\tGO:0005634; GO:0046872; GO:0003676; GO:0006355\t\t\t\tENSRNOG00000029043\tENSRNOT00000073521\tENSRNOP00000066294\t\t\t\r\n+\t\t\t\t\t\tGO:0008289\t\t\t\tENSRNOG00000050088\tENSRNOT00000071869\tENSRNOP00000067424\t\t\t\r\n+\t\t\t\t\t\tGO:0015935; GO:0019843; GO:0003735; GO:0006412\t\t\t\tENSRNOG00000058909\tENSRNOT00000091654\tENSRNOP00000072986\t\t\t\r\n+\t\t\t\t\t\tGO:0005737; GO:0005615; GO:0016021; GO:0005125; GO:0005164; GO:0006955; GO:0048298\t\t\t\tENSRNOG00000014171\tENSRNOT00000090762\tENSRNOP00000073136\t\t\t\r\n+\t\t\t\t\t\tGO:0005615; GO:0016021; GO:0006955; GO:0002377\t\t\t\tENSRNOG00000057618\tENSRNOT00000085460\tENSRNOP00000073204\t\t\t\r\n+\t\t\t\t\t\tGO:0005737; GO:0006914\t\t\t\tENSRNOG00000038106\tENSRNOT00000019033\tENSRNOP00000075089\t\t\t\r\n+\t\t\t\t\t\tGO:0010824\t\t\t\tENSRNOG00000060699\tENSRNOT00000082814\tENSRNOP00000075618\t\t\t\r\n+\t\t\t\t1368833241\t\tGO:0016021\t\t\t\t\t\t\t\t\t\r\n' |
| b |
| diff -r 5252bbcfbdd7 -r 9d758344d36e tool-data/Rat_id_mapping_27-05-2019.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/Rat_id_mapping_27-05-2019.tsv Wed Jun 19 04:38:12 2019 -0400 |
| b |
| b'@@ -0,0 +1,36108 @@\n+UniProt-AC\tUniProt-ID\tGeneID\tRefSeq\tGI\tPDB\tGO\tPIR\tMIM\tUniGene\tEnsembl_Gene\tEnsembl_Transcript\tEnsembl_Protein\tBioGrid\tSTRING\tKEGG\r\n+P35213\t1433B_RAT\t56011\tNP_062250.1\t1911805; 265428; 49904289; 9507243; 1345591; 149042981; 402524\t\tGO:0005737; GO:0005829; GO:0042470; GO:0005634; GO:0048471; GO:0032991; GO:0017053; GO:0042826; GO:0042802; GO:0050815; GO:0008022; GO:0019904; GO:0044877; GO:0051220; GO:0045744; GO:0035308; GO:0045892; GO:0043085; GO:0051291; GO:0006605\tA49023\t\t\tENSRNOG00000010945\tENSRNOT00000016981\tENSRNOP00000016981\t248554\t10116.ENSRNOP00000016981\trno:56011\r\n+P62260\t1433E_RAT\t29753\tNP_113791.1\t487918; 149053422; 38648857; 13928824; 1469948; 61216932; 294504\t\tGO:0030424; GO:0090724; GO:0005737; GO:0005829; GO:0098978; GO:0005871; GO:0042470; GO:0005634; GO:0005886; GO:0045202; GO:0005246; GO:0019899; GO:0042826; GO:0042802; GO:0044325; GO:0050815; GO:0015459; GO:0019904; GO:0046982; GO:0008426; GO:0044877; GO:0097110; GO:0031625; GO:0034605; GO:0021987; GO:0021766; GO:0000165; GO:1905913; GO:1901020; GO:1902309; GO:0001764; GO:0046827; GO:0034504; GO:0006605; GO:0051480; GO:0060306; GO:0099072; GO:1901016; GO:0007165\tJX0341\t\t\tENSRNOG00000005290\tENSRNOT00000007100\tENSRNOP00000007100\t248364\t10116.ENSRNOP00000007100\trno:29753\r\n+P68511\t1433F_RAT\t25576\tNP_037184.1\t51858611; 398155; 6981710; 55976637; 149047466\t\tGO:0005737; GO:0045202; GO:0019904; GO:0017080; GO:0086010; GO:2000649; GO:0002028\tA60031\t\t\tENSRNOG00000055471\tENSRNOT00000085735\tENSRNOP00000075701\t247607\t10116.ENSRNOP00000024388\trno:25576\r\n+P61983\t1433G_RAT\t56010\tNP_062249.1; XP_006249246.2\t149063017; 402526; 48428718; 117558830; 265430; 1046854730; 9507245\t\tGO:0005737; GO:0098793; GO:0045202; GO:0031982; GO:0003779; GO:0030234; GO:0042802; GO:0005159; GO:0019904; GO:0005080; GO:0030971; GO:0032869; GO:0006605; GO:0045664; GO:0048167; GO:0007165\tB49023\t\t\tENSRNOG00000001436\tENSRNOT00000001954; ENSRNOT00000084730\tENSRNOP00000001954; ENSRNOP00000069671\t248553\t10116.ENSRNOP00000001954\trno:56010\r\n+P68255\t1433T_RAT\t25577\tNP_037185.1\t402509; 149051000; 61216933; 6981712; 38383130\t\tGO:0005737; GO:0032991; GO:0045202; GO:0071889; GO:0042802; GO:0044325; GO:0008022; GO:0019904; GO:0047485; GO:0034766; GO:0045892; GO:0006605; GO:0007264\tI52647\t\t\tENSRNOG00000051650\tENSRNOT00000077786\tENSRNOP00000072011\t247608\t10116.ENSRNOP00000011501\trno:25577\r\n+P63102\t1433Z_RAT\t25578\tNP_037143.2; XP_006241591.1\t62871703; 294506; 564359766; 62990183; 402511; 52000883; 68085421; 487920; 149066515; 1051270\t\tGO:0031252; GO:0042629; GO:0042470; GO:0005739; GO:0048471; GO:0014069; GO:0032991; GO:0019904; GO:0044877; GO:0002553; GO:0006626; GO:0042493\tJC2502; JC5232; S59915\t\t\tENSRNOG00000008195\tENSRNOT00000035628\tENSRNOP00000030885\t247609\t10116.ENSRNOP00000030885\trno:25578\r\n+P22282\t22P1_RAT\t25030\tNP_036850.1\t112720; 205903; 7549742; 299360; 260883; 530167\t\tGO:0005829; GO:0005634; GO:0004869; GO:0030521\tA49304\t\t\t\t\t\t\t10116.ENSRNOP00000040184\trno:25030\r\n+P22283\t22P2_RAT\t296229\tNP_954887.1\t41152508; 112721; 205905; 149041137; 56013; 72679563\t\tGO:0004869\tJT0616\t\t\t\t\t\t\t10116.ENSRNOP00000043921\trno:296229\r\n+Q80W83\t2A5B_RAT\t309179\tNP_852044.1; XP_008758365.1\t31077118; 672039381; 81873316; 149062165; 60422755; 30575399\t\tGO:0005829; GO:0005634; GO:0000159; GO:0072542; GO:0071363; GO:0070317; GO:0071158; GO:0051091; GO:0010976; GO:0051388; GO:0031334; GO:0045944; GO:0006470; GO:0050730; GO:0031952; GO:0001932; GO:0010469; GO:0007165\t\t\t\tENSRNOG00000021025\tENSRNOT00000028542\tENSRNOP00000028542\t\t10116.ENSRNOP00000065720\trno:309179\r\n+Q4QQT4\t2AAB_RAT\t315648\tNP_001020589.1\t81918149; 70794752; 67678118\t\tGO:0005737; GO:0045121; GO:0000159; GO:0019888; GO:0060561; GO:2001241; GO:0006470\t\t\t\tENSRNOG00000010922\tENSRNOT00000064290\tENSRNOP00000059428\t261094\t10116.ENSRNOP00000059428\trno:315648\r\n+P36876\t2ABA_RAT\t117104\tNP_446451.1\t2346992; 206297; 206299; 16758910; 118764362; 543717; 149030346\t\tGO:0005829; GO:0098978; GO:0000159; GO:0051721; GO:0019888; GO:0004722; GO:0044877; GO:0048156; GO:0000278'..b'06\t\t\t\r\n+NA\tM0RB11_RAT\t\t\t\t\tGO:0016021; GO:0005739; GO:0020037; GO:0015232; GO:0001568; GO:0042733; GO:0048704; GO:0030218; GO:0060323; GO:0097037; GO:0001701; GO:0006839; GO:0035264; GO:0046620; GO:0048536\t\t\t\tENSRNOG00000049633\tENSRNOT00000072452\tENSRNOP00000066732\t\t\t\r\n+NA\tD3ZVE6_RAT\t\t\t\t\tGO:0016021; GO:0030246\t\t\t\tENSRNOG00000010057\tENSRNOT00000068661\tENSRNOP00000063466\t\t\t\r\n+NA\tD3Z9C7_RAT\t\t\t\t\tGO:0048786; GO:0007416\t\t\t\tENSRNOG00000005726\tENSRNOT00000008637\tENSRNOP00000008637\t\t\t\r\n+NA\tD3ZM01_RAT\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSRNOG00000029835\tENSRNOT00000040565\tENSRNOP00000041458\t\t\t\r\n+NA\tA0A0G2JT64_RAT\t\t\t\t\tGO:0005829; GO:0005739; GO:0008106; GO:0004032; GO:0070401; GO:0052650; GO:0070402; GO:0016491; GO:0016918; GO:0019751; GO:0042574; GO:0042572\t\t\t\tENSRNOG00000009734\tENSRNOT00000078996\tENSRNOP00000068585\t\t\t\r\n+NA\tA0A0G2K375_RAT\t\t\t\t\tGO:0071013; GO:1990726; GO:0000932; GO:0046540; GO:0005688; GO:0006397\t\t\t\tENSRNOG00000011065\tENSRNOT00000014753\tENSRNOP00000072528\t\t\t\r\n+NA\tM0R6W4_RAT\t\t\t\t\tGO:0005840; GO:0003735; GO:0006412\t\t\t\tENSRNOG00000047774\tENSRNOT00000075169\tENSRNOP00000065173\t\t\t\r\n+NA\tQ63329_RAT\t\t\t81863292; 205302\t\t\tI52083\t\t\t\t\t\t\t\t\r\n+NA\tA0A0G2KA87_RAT\t\t\t\t\tGO:0016021\t\t\t\tENSRNOG00000059973\tENSRNOT00000089152\tENSRNOP00000075304\t\t\t\r\n+NA\tA0A0G2K0W0_RAT\t\t\t\t\tGO:0016740; GO:0008299\t\t\t\tENSRNOG00000016767\tENSRNOT00000090387\tENSRNOP00000071601\t\t\t\r\n+NA\tA0A0G2K7Q4_RAT\t\t\t\t\tGO:0000790; GO:0005667; GO:0003680; GO:0001228; GO:0070888; GO:0046982; GO:0042803; GO:0008134; GO:0007512; GO:0003278; GO:0003253; GO:0003219; GO:0060536; GO:0061325; GO:0060982; GO:0042733; GO:0001947; GO:0001701; GO:0010463; GO:0010667; GO:0043392; GO:0043433; GO:0010629; GO:0045668; GO:0042475; GO:0048935; GO:0010613; GO:0070374; GO:1900745; GO:2000764; GO:2000763; GO:2000679; GO:1903929; GO:0003266; GO:0034103; GO:0001967; GO:0048485; GO:0048538; GO:0043586; GO:0061032\t\t\t\tENSRNOG00000060448\tENSRNOT00000079552\tENSRNOP00000074299\t\t\t\r\n+NA\tA0A0G2KB77_RAT\t\t\t\t\tGO:0022625; GO:0003735; GO:0002181\t\t\t\tENSRNOG00000022022\tENSRNOT00000030173\tENSRNOP00000075685\t\t\t\r\n+NA\tA0A0G2JUD5_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000058517\tENSRNOT00000087468\tENSRNOP00000069056\t\t\t\r\n+NA\tA0A0G2K023_RAT\t\t\t\t\tGO:0005604; GO:0014002; GO:0000904; GO:0060041; GO:0007601\t\t\t\tENSRNOG00000059507\tENSRNOT00000090137\tENSRNOP00000071272\t\t\t\r\n+NA\tA0A0G2K1D1_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000056854\tENSRNOT00000084127\tENSRNOP00000071794\t\t\t\r\n+NA\tA0A0H2UHJ2_RAT\t\t\t\t\tGO:0005654; GO:0051726\t\t\t\tENSRNOG00000011379\tENSRNOT00000015472\tENSRNOP00000015472\t\t\t\r\n+NA\tA0A140GE10_RAT\t\t\t1002159869\t\tGO:0016021; GO:0005743; GO:0045275; GO:0046872; GO:0008121; GO:0006122\t\t\t\t\t\t\t\t\t\r\n+NA\tD3ZDY2_RAT\t\t\t\t\tGO:0005524; GO:0004672\t\t\t\tENSRNOG00000025037\tENSRNOT00000068040\tENSRNOP00000062510\t\t\t\r\n+NA\tF1LUG5_RAT\t\t\t\t\tGO:0016021\t\t\t\tENSRNOG00000004032\tENSRNOT00000005684\tENSRNOP00000005684\t\t\t\r\n+NA\tF1LNL5_RAT\t\t\t\t\tGO:0005912; GO:0031463; GO:0005737; GO:0030057; GO:0045109; GO:0051865; GO:2000312\t\t\t\tENSRNOG00000033372\tENSRNOT00000052120\tENSRNOP00000050815\t\t\t\r\n+NA\tF1LUQ9_RAT\t\t\t\t\tGO:0005634; GO:0016538; GO:0006357\t\t\t\tENSRNOG00000038481\tENSRNOT00000058643\tENSRNOP00000055438\t\t\t\r\n+NA\tA0A1W2Q6P1_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000006498\tENSRNOT00000093515\tENSRNOP00000076349\t\t\t\r\n+NA\tD3Z9R6_RAT\t\t\t\t\tGO:0009897; GO:0016021; GO:0005102; GO:0050776; GO:0050852\t\t\t\tENSRNOG00000000335\tENSRNOT00000039305\tENSRNOP00000034890\t\t\t\r\n+NA\tD3ZBP7_RAT\t\t\t\t\tGO:0005783; GO:0008422; GO:0005975\t\t\t\tENSRNOG00000009193\tENSRNOT00000012308\tENSRNOP00000012308\t\t\t\r\n+NA\tD3ZJX6_RAT\t\t\t\t\tGO:0020037; GO:0005506; GO:0016705\t\t\t\tENSRNOG00000009597\tENSRNOT00000057095\tENSRNOP00000053925\t\t\t\r\n+NA\tA0A0G2JWD2_RAT\t\t\t\t\tGO:0030424; GO:0043034; GO:0005829; GO:0043197; GO:0098978; GO:0005634; GO:0048471; GO:0005844; GO:0035770; GO:0003729; GO:0046982; GO:0042803; GO:0033592; GO:0007517; GO:2000637; GO:0006417\t\t\t\tENSRNOG00000051480\tENSRNOT00000088442\tENSRNOP00000069834\t\t\t\r\n+NA\tA0A0G2K206_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000031483\tENSRNOT00000043247\tENSRNOP00000072058\t\t\t\r\n+NA\tE9PTU6_RAT\t\t\t\t\t\t\t\t\tENSRNOG00000011997\tENSRNOT00000015975\tENSRNOP00000015975\t\t\t\r\n' |