| Previous changeset 0:ebee10be4297 (2017-03-01) Next changeset 2:13632190a0ff (2017-04-20) |
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Commit message:
planemo upload commit 9d3d0b2dc47cc803e560e396e5c13d2cfef9ed03 |
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modified:
sistr_cmd.xml |
| b |
| diff -r ebee10be4297 -r 9d7e381dfa5a sistr_cmd.xml --- a/sistr_cmd.xml Wed Mar 01 12:35:39 2017 -0500 +++ b/sistr_cmd.xml Fri Mar 03 14:31:21 2017 -0500 |
| b |
| @@ -14,13 +14,7 @@ -i '$fasta' '${$fasta.name.replace("." + $fasta.ext, "")}' #end for -f $output_format - #if $output_format == "tab" - -o sistr-report.tab - #elif $output_format == "csv" - -o sistr-report.csv - #elif $output_format == "json" - -o sistr-report.json - #end if + -o sistr-report.$output_format -p $cgmlst_profiles -n $novel_alleles -a $alleles_output |