Repository 'maxbin2'
hg clone https://toolshed.g2.bx.psu.edu/repos/mbernt/maxbin2

Changeset 8:9da9706f7ca9 (2024-01-14)
Previous changeset 7:28a0b1446d2b (2023-12-20)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maxbin2/ commit a1af4fcdd71f8a85f03db880bcc22751acd5e722
modified:
maxbin2.xml
b
diff -r 28a0b1446d2b -r 9da9706f7ca9 maxbin2.xml
--- a/maxbin2.xml Wed Dec 20 20:27:57 2023 +0000
+++ b/maxbin2.xml Sun Jan 14 17:20:43 2024 +0000
[
@@ -1,4 +1,4 @@
-<tool id="maxbin2" name="MaxBin2" version="@MAXBIN_VERSION@+galaxy5">
+<tool id="maxbin2" name="MaxBin2" version="@MAXBIN_VERSION@+galaxy6">
     <description>clusters metagenomic contigs into bins</description>
     <macros>
         <token name="@MAXBIN_VERSION@">2.2.7</token>
@@ -41,7 +41,7 @@
     #else
         #for $i, $r in enumerate($assembly.inputs.reads)
             #if $r
-                #set $identifier = re.sub('[^\s\w\-\\.]', '_', str($r.element_identifier))
+                #set $identifier = re.sub('[^\w\-\\.]', '_', str($r.element_identifier))
                 #set $newid = $identifier +  '_'  + str($i)
                 #if $r.ext.endswith(".gz")
 gunzip -c '$r' > '$newid' &&