| Previous changeset 0:cc6c4d6ebceb (2014-05-22) |
|
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_mummer_3_23 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty |
|
modified:
tool_dependencies.xml |
| b |
| diff -r cc6c4d6ebceb -r 9ddc606546c3 tool_dependencies.xml --- a/tool_dependencies.xml Thu May 22 08:44:10 2014 -0400 +++ b/tool_dependencies.xml Fri Jul 17 10:38:53 2015 -0400 |
| b |
| @@ -18,8 +18,14 @@ </actions> </install> <readme> +MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. +For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, +using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it can easily handle the 100s or 1000s +of contigs from a shotgun sequencing project, and will align them to another set of contigs or a genome using the NUCmer program included with the system. +If the species are too divergent for a DNA sequence alignment to detect similarity, then the PROmer program can generate +alignments based upon the six-frame translations of both input sequences. + http://mummer.sourceforge.net/ -MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it can easily handle the 100s or 1000s of contigs from a shotgun sequencing project, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for a DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences. </readme> </package> </tool_dependency> |