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tool_dependencies.xml |
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| diff -r 000000000000 -r 9f59d1a59999 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Sat Feb 22 05:47:42 2014 -0500 |
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| @@ -0,0 +1,21 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="mcl" version="12.135"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://micans.org/mcl/src/mcl-12-135.tar.gz</action> + <action type="shell_command"> + ./configure --prefix=$INSTALL_DIR + </action> + <action type="shell_command">make install</action> + <action type="set_environment"> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme> + The MCL algorithm is short for the Markov Cluster Algorithm, a fast and scalable unsupervised cluster algorithm for graphs (also known as networks) based on simulation of (stochastic) flow in graphs. + http://micans.org/mcl/ + </readme> + </package> +</tool_dependency> |