| Previous changeset 4:9ccde1867fbb (2018-06-11) Next changeset 6:165732ee5a48 (2018-06-11) |
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Commit message:
Replaces Rscript by R CMD BATCH |
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modified:
exomedepth.xml |
| b |
| diff -r 9ccde1867fbb -r a0a30c52978a exomedepth.xml --- a/exomedepth.xml Mon Jun 11 09:32:44 2018 -0400 +++ b/exomedepth.xml Mon Jun 11 09:33:31 2018 -0400 |
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| @@ -3,8 +3,8 @@ <requirements> <requirement type="package" version="1.1.10">r-exomedepth</requirement> </requirements> - <command interpreter="Rscript"> - exomedepth.R $args_file + <command> + R CMD BATCH --no-save --no-restore '--args mypars="$args_file"' $__tool_directory__/exomedepth.R </command> <inputs> <param format="bed" name="targetFile" type="data" label="Target regions (BED)"> |