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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_1_1_2 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d |
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added:
tool_dependencies.xml |
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| diff -r 000000000000 -r a1c1a92e13a6 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Nov 20 06:48:21 2015 -0500 |
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| @@ -0,0 +1,51 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="bowtie" version="1.1.2"> + <install version="1.0"> + <actions> + <action type="download_by_url" sha256sum="b72c62bb00046d10e83ad1fb51049bb88fd8fa01745ce13c5aeadb8c008f0a73">https://codeload.github.com/BenLangmead/bowtie/zip/v1.1.2</action> + <action type="shell_command">make</action> + <action type="move_file"> + <source>bowtie</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-align-s</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-align-l</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-build</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-build-l</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-build-s</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-inspect</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-inspect-l</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="move_file"> + <source>bowtie-inspect-s</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + </action> + </actions> + </install> + <readme></readme> + </package> +</tool_dependency> |