| Previous changeset 1:76d01fe0ec36 (2017-07-05) Next changeset 3:38aab66ae5cb (2018-01-31) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/limma_voom commit 346319bd01bfd51f02d656e653a93f0bd1e954aa |
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modified:
limma_voom.R limma_voom.xml |
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| diff -r 76d01fe0ec36 -r a330ddf43861 limma_voom.R --- a/limma_voom.R Wed Jul 05 04:39:42 2017 -0400 +++ b/limma_voom.R Thu Sep 07 05:27:27 2017 -0400 |
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| @@ -156,7 +156,7 @@ # Process factors if (as.character(argv[16])=="None") { factorData <- read.table(factPath, header=TRUE, sep="\t") - factors <- factorData[,-1] + factors <- factorData[,-1, drop=FALSE] } else { factorData <- list() for (i in 16:length(argv)) { @@ -570,10 +570,13 @@ TableHeadItem("SampleID") TableHeadItem(names(factors)[1]," (Primary Factor)") -for (i in names(factors)[2:length(names(factors))]) { - TableHeadItem(i) -} -cata("</tr>\n") + if (ncol(factors) > 1) { + + for (i in names(factors)[2:length(names(factors))]) { + TableHeadItem(i) + } + cata("</tr>\n") + } for (i in 1:nrow(factors)) { cata("<tr>\n") |
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| diff -r 76d01fe0ec36 -r a330ddf43861 limma_voom.xml --- a/limma_voom.xml Wed Jul 05 04:39:42 2017 -0400 +++ b/limma_voom.xml Thu Sep 07 05:27:27 2017 -0400 |
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| @@ -66,7 +66,7 @@ mkdir ./output_dir && -mv '$outReport.files_path'/*.tsv output_dir/ +cp '$outReport.files_path'/*.tsv output_dir/ ]]></command> <inputs> |