| Previous changeset 3:240af4b07b92 (2017-08-08) Next changeset 5:a1a34771304e (2017-11-26) |
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Commit message:
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_wgcna commit d9ab791a7ce12362dc6e28c0a518a3f23dd581fe-dirty |
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modified:
wgcna_construct_network.xml wgcna_eigengene_visualization.xml wgcna_preprocessing.xml |
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| diff -r 240af4b07b92 -r a41eb67bce4c wgcna_construct_network.xml --- a/wgcna_construct_network.xml Tue Aug 08 15:06:26 2017 -0400 +++ b/wgcna_construct_network.xml Tue Oct 17 19:14:03 2017 -0400 |
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| @@ -1,8 +1,8 @@ -<tool id="wgcna_construct_network" name="WGCNA: construct network" version="1.0.0"> +<tool id="wgcna_construct_network" name="WGCNA: construct network" version="1.0.1"> <requirements> <requirement type="package" version="1.15.0.6-0">pandoc</requirement> <requirement type="package" version="1.20.0">r-getopt</requirement> - <requirement type="package" version="1.2">r-rmarkdown</requirement> + <requirement type="package" version="1.3">r-rmarkdown</requirement> <requirement type="package" version="1.8.4">r-plyr</requirement> <requirement type="package" version="0.4.0">r-highcharter</requirement> <requirement type="package" version="0.2">r-dt</requirement> |
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| diff -r 240af4b07b92 -r a41eb67bce4c wgcna_eigengene_visualization.xml --- a/wgcna_eigengene_visualization.xml Tue Aug 08 15:06:26 2017 -0400 +++ b/wgcna_eigengene_visualization.xml Tue Oct 17 19:14:03 2017 -0400 |
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| @@ -1,8 +1,8 @@ -<tool id="wgcna_eigengene_visualization" name="WGCNA: eigengene visualization" version="1.0.0"> +<tool id="wgcna_eigengene_visualization" name="WGCNA: eigengene visualization" version="1.0.1"> <requirements> <requirement type="package" version="1.15.0.6-0">pandoc</requirement> <requirement type="package" version="1.20.0">r-getopt</requirement> - <requirement type="package" version="1.2">r-rmarkdown</requirement> + <requirement type="package" version="1.3">r-rmarkdown</requirement> <requirement type="package" version="1.8.4">r-plyr</requirement> <requirement type="package" version="0.4.0">r-highcharter</requirement> <requirement type="package" version="0.2">r-dt</requirement> |
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| diff -r 240af4b07b92 -r a41eb67bce4c wgcna_preprocessing.xml --- a/wgcna_preprocessing.xml Tue Aug 08 15:06:26 2017 -0400 +++ b/wgcna_preprocessing.xml Tue Oct 17 19:14:03 2017 -0400 |
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| @@ -1,8 +1,8 @@ -<tool id="wgcna_preprocessing" name="WGCNA: preprocessing" version="1.0.0"> +<tool id="wgcna_preprocessing" name="WGCNA: preprocessing" version="1.0.1"> <requirements> <requirement type="package" version="1.15.0.6-0">pandoc</requirement> <requirement type="package" version="1.20.0">r-getopt</requirement> - <requirement type="package" version="1.2">r-rmarkdown</requirement> + <requirement type="package" version="1.3">r-rmarkdown</requirement> <requirement type="package" version="1.8.4">r-plyr</requirement> <requirement type="package" version="0.4.0">r-highcharter</requirement> <requirement type="package" version="0.2">r-dt</requirement> @@ -55,7 +55,6 @@ <inputs> <param type="data" name="expression_data" format="csv" optional="false" label="Gene expression data" help="Each row represents a gene and each column represents a sample."/> - <param type="boolean" name="echo" truevalue="TRUE" falsevalue="FALSE" checked="false" label="Display analysis code in report?" /> </inputs> <outputs> |