Repository 'saint_preprocessing'
hg clone https://toolshed.g2.bx.psu.edu/repos/bornea/saint_preprocessing

Changeset 68:a48ac530e4fe (2016-08-27)
Previous changeset 67:b8169cc0b860 (2016-08-27) Next changeset 69:f6fbe5d6a94f (2016-08-27)
Commit message:
Uploaded
modified:
mzID_process2.py
b
diff -r b8169cc0b860 -r a48ac530e4fe mzID_process2.py
--- a/mzID_process2.py Sat Aug 27 22:40:09 2016 -0400
+++ b/mzID_process2.py Sat Aug 27 22:56:13 2016 -0400
[
@@ -131,7 +131,7 @@
 
 files = sys.argv[1]
 file_list = files.split(",")
-bait = read_tab(sys.argv[2])
+
 make_prey = sys.argv[3]
 db = sys.argv[4]
 if db == "None":
@@ -174,6 +174,7 @@
         bait_file_tmp.write(cache_line)
     bait_file_tmp.close()
     bait = "bait.txt"
+bait = read_tab("bait.txt")
 
 inter = ""
 cnt = 0