| Previous changeset 15:5d2c8acd2ae4 (2020-11-25) Next changeset 17:14866357fbec (2021-04-12) |
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Commit message:
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 045c1232e9d8cdc7bc084e089900e9bd17fc47e1-dirty" |
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modified:
scanpy-run-fdg.xml |
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| diff -r 5d2c8acd2ae4 -r a6190ae4fe16 scanpy-run-fdg.xml --- a/scanpy-run-fdg.xml Wed Nov 25 16:21:23 2020 +0000 +++ b/scanpy-run-fdg.xml Tue Mar 23 16:32:40 2021 +0000 |
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| @@ -1,5 +1,5 @@ <?xml version="1.0" encoding="utf-8"?> -<tool id="scanpy_run_fdg" name="Scanpy RunFDG" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@"> +<tool id="scanpy_run_fdg" name="Scanpy RunFDG" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> <description>visualise cell clusters using force-directed graph</description> <macros> <import>scanpy_macros2.xml</import> @@ -47,9 +47,7 @@ <param name="neighbors_key" argument="--neighbors-key" value="neighbors" type="text" label="Name of the slot that holds the KNN graph"/> <param name="obsp" type="boolean" checked="false" label="Use .obsp[obsp] as adjacency" help="You can’t specify both obsp and neighbors-key at the same time."/> - <param name="init_pos" argument="--init-pos" type="text" label="Method to initialise embedding, any key for adata.obsm or choose from the preset methods"> - <option value="paga">paga</option> - </param> + <param name="init_pos" argument="--init-pos" type="text" label="Method to initialise embedding, any key for adata.obsm or choose from the preset methods"/> <param name="layout" argument="--layout" type="select" label="Graph layout"> <option value="fa">fa</option> <option value="fr" selected="true">fr</option> |