Repository 'table_annovar'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/table_annovar

Changeset 1:a6c64723f5ce (2013-12-02)
Previous changeset 0:75b252cf390e (2013-12-02) Next changeset 2:9c75a9b5ecd2 (2014-01-27)
Commit message:
Uploaded
added:
tool-data/annovar_index.loc.sample
removed:
tool-data/annovar_index.loc
b
diff -r 75b252cf390e -r a6c64723f5ce tool-data/annovar_index.loc
--- a/tool-data/annovar_index.loc Mon Dec 02 15:29:39 2013 -0500
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
b
@@ -1,20 +0,0 @@
-#
-# Database name (value), dbkey, type, and path.
-#
-# Sample entries for gene-based annotations:
-#refGene hg19 gene_ann /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#wgEncodeGencodeCompV14 hg19 gene_ann /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#
-# Samples entries for region-based annotations:
-#
-#genomicSuperDups hg19 region /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#phastConsElements46way hg19 region /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#
-# Sample entries for filter-based annotations:
-#
-#1000g2012apr_all hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#avsift hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#snp137NonFlagged hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#esp6500si_all hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/
-#snp137 hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#cosmic64 hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
\ No newline at end of file
b
diff -r 75b252cf390e -r a6c64723f5ce tool-data/annovar_index.loc.sample
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/annovar_index.loc.sample Mon Dec 02 15:31:17 2013 -0500
b
@@ -0,0 +1,20 @@
+#
+# Database name (value), dbkey, type, and path.
+#
+# Sample entries for gene-based annotations:
+#refGene hg19 gene_ann /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#wgEncodeGencodeCompV14 hg19 gene_ann /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#
+# Samples entries for region-based annotations:
+#
+#genomicSuperDups hg19 region /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#phastConsElements46way hg19 region /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#
+# Sample entries for filter-based annotations:
+#
+#1000g2012apr_all hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#avsift hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#snp137NonFlagged hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#esp6500si_all hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/
+#snp137 hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#cosmic64 hg19 filter /aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
\ No newline at end of file