| Next changeset 1:1a15120c22c8 (2017-09-21) |
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Commit message:
planemo upload commit d476446dd23645b740023fe2abacabeefca4c5a1 |
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added:
tool_dependencies.xml |
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| diff -r 000000000000 -r a819439b6d76 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed May 31 11:33:10 2017 -0400 |
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| @@ -0,0 +1,37 @@ +<?xml version="1.0" ?> +<tool_dependency> + <package name="ucsc_hac" version="340"> + <install version="1.0"> + <actions_group> + <actions architecture="x86_64" os="darwin"> + <action type="download_by_url" sha256sum="c18fcb8ed0468dff74c6392b929be532aab777db1c2a8d1d9d83f94f585602d5">http://old-gep.wustl.edu/~galaxy/packages/ucsc_hac_340_macOS_x86_64.tar.gz</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <actions architecture="x86_64" os="linux"> + <action type="download_by_url" sha256sum="13ad4c6bdc0ed669446dea0cc7ab3db0877ea844665485ea93c3f16c96e408a4">http://old-gep.wustl.edu/~galaxy/packages/ucsc_hac_340_linux_x86_64.tar.gz</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions_group> + </install> + <readme>The well known UCSC tools from Jim Kent. This subset of UCSC tools are used for HubArchiveCreator, including + - bedGraphToBigWig + - bedToBigBed + - gff3ToGenePred + - gtfToGenePred + - genePredToBed + - genePredToBigGenePred + - faToTwoBit + - pslToBigPsl + - twoBitInfo + </readme> + </package> +</tool_dependency> |