| Previous changeset 7:c31665c5069c (2025-07-15) |
|
Commit message:
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__diversity_lib commit 64ed09f1f1c680ad8373d261bd6be43a4f8a8d5b |
|
modified:
qiime2__diversity_lib__pielou_evenness.xml test-data/alpha_passthrough.test0.feature-table.qza test-data/beta_passthrough.test0.feature-table.qza test-data/beta_passthrough.test1.feature-table.qza test-data/beta_passthrough.test2.feature-table.qza test-data/beta_passthrough.test3.feature-table.qza test-data/beta_phylogenetic_meta_passthrough.test0.feature-table1.qza test-data/beta_phylogenetic_meta_passthrough.test0.feature-table2.qza test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny1.qza test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny2.qza test-data/beta_phylogenetic_meta_passthrough.test1.feature-table1.qza test-data/beta_phylogenetic_meta_passthrough.test1.feature-table2.qza test-data/beta_phylogenetic_meta_passthrough.test1.phylogeny.qza test-data/beta_phylogenetic_meta_passthrough.test2.feature-table1.qza test-data/beta_phylogenetic_meta_passthrough.test2.feature-table2.qza test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny1.qza test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny2.qza test-data/beta_phylogenetic_passthrough.test0.feature-table.qza test-data/beta_phylogenetic_passthrough.test0.phylogeny.qza test-data/beta_phylogenetic_passthrough.test1.feature-table.qza test-data/beta_phylogenetic_passthrough.test1.phylogeny.qza test-data/beta_phylogenetic_passthrough.test2.feature-table.qza test-data/beta_phylogenetic_passthrough.test2.phylogeny.qza test-data/beta_phylogenetic_passthrough.test3.feature-table.qza test-data/beta_phylogenetic_passthrough.test3.phylogeny.qza test-data/beta_phylogenetic_passthrough.test4.feature-table.qza test-data/beta_phylogenetic_passthrough.test4.phylogeny.qza test-data/beta_phylogenetic_passthrough.test5.feature-table.qza test-data/beta_phylogenetic_passthrough.test5.phylogeny.qza test-data/beta_phylogenetic_passthrough.test6.feature-table.qza test-data/beta_phylogenetic_passthrough.test6.phylogeny.qza test-data/bray_curtis.test0.feature-table.qza test-data/bray_curtis.test1.feature-table.qza test-data/bray_curtis.test2.feature-table.qza test-data/faith_pd.test0.feature-table.qza test-data/faith_pd.test0.phylogeny.qza test-data/jaccard.test0.feature-table.qza test-data/jaccard.test1.feature-table.qza test-data/jaccard.test2.feature-table.qza test-data/observed_features.test0.feature-table.qza test-data/pielou_evenness.test0.feature-table.qza test-data/pielou_evenness.test1.feature-table.qza test-data/shannon_entropy.test0.feature-table.qza test-data/shannon_entropy.test1.feature-table.qza test-data/unweighted_unifrac.test0.feature-table.qza test-data/unweighted_unifrac.test0.phylogeny.qza test-data/unweighted_unifrac.test1.feature-table.qza test-data/unweighted_unifrac.test1.phylogeny.qza test-data/unweighted_unifrac.test2.feature-table.qza test-data/unweighted_unifrac.test2.phylogeny.qza test-data/unweighted_unifrac.test3.feature-table.qza test-data/unweighted_unifrac.test3.phylogeny.qza test-data/weighted_unifrac.test0.feature-table.qza test-data/weighted_unifrac.test0.phylogeny.qza test-data/weighted_unifrac.test1.feature-table.qza test-data/weighted_unifrac.test1.phylogeny.qza test-data/weighted_unifrac.test2.feature-table.qza test-data/weighted_unifrac.test2.phylogeny.qza test-data/weighted_unifrac.test3.feature-table.qza test-data/weighted_unifrac.test3.phylogeny.qza |
|
added:
test-data/shannon_entropy.test2.feature-table.qza |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 qiime2__diversity_lib__pielou_evenness.xml --- a/qiime2__diversity_lib__pielou_evenness.xml Tue Jul 15 21:52:47 2025 +0000 +++ b/qiime2__diversity_lib__pielou_evenness.xml Sat Nov 01 17:17:33 2025 +0000 |
| [ |
| @@ -6,17 +6,17 @@ --> <!-- This tool was automatically generated by: - q2galaxy (version: 2025.7.0) + q2galaxy (version: 2025.10.0) for: - qiime2 (version: 2025.7.0) + qiime2 (version: 2025.10.0) --> -<tool name="qiime2 diversity-lib pielou-evenness" id="qiime2__diversity_lib__pielou_evenness" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 diversity-lib pielou-evenness" id="qiime2__diversity_lib__pielou_evenness" version="2025.10.0+q2galaxy.2025.10.0" profile="22.05" license="BSD-3-Clause"> <description>Pielou's Evenness</description> <xrefs> <xref type="bio.tools">qiime2</xref> </xrefs> <requirements> - <container type="docker">quay.io/qiime2/amplicon:2025.7</container> + <container type="docker">quay.io/qiime2/amplicon:2025.10</container> </requirements> <version_command>q2galaxy version diversity_lib</version_command> <command detect_errors="exit_code">q2galaxy run diversity_lib pielou_evenness '$inputs'</command> @@ -26,8 +26,8 @@ <inputs> <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency | RelativeFrequency]" help="[required] The feature table containing the samples for which Pielou's evenness should be computed."> <options options_filter_attribute="metadata.semantic_type"> + <filter type="add_value" value="FeatureTable[Frequency]"/> <filter type="add_value" value="FeatureTable[RelativeFrequency]"/> - <filter type="add_value" value="FeatureTable[Frequency]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]', 'FeatureTable[RelativeFrequency]']</validator> </param> |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/alpha_passthrough.test0.feature-table.qza |
| b |
| Binary file test-data/alpha_passthrough.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_passthrough.test0.feature-table.qza |
| b |
| Binary file test-data/beta_passthrough.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_passthrough.test1.feature-table.qza |
| b |
| Binary file test-data/beta_passthrough.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_passthrough.test2.feature-table.qza |
| b |
| Binary file test-data/beta_passthrough.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_passthrough.test3.feature-table.qza |
| b |
| Binary file test-data/beta_passthrough.test3.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test0.feature-table1.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test0.feature-table1.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test0.feature-table2.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test0.feature-table2.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny1.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny1.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny2.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny2.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test1.feature-table1.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test1.feature-table1.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test1.feature-table2.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test1.feature-table2.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test1.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test1.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test2.feature-table1.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test2.feature-table1.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test2.feature-table2.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test2.feature-table2.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny1.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny1.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny2.qza |
| b |
| Binary file test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny2.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test0.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test0.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test0.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test1.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test1.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test1.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test2.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test2.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test2.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test3.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test3.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test3.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test3.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test4.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test4.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test4.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test4.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test5.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test5.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test5.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test5.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test6.feature-table.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test6.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/beta_phylogenetic_passthrough.test6.phylogeny.qza |
| b |
| Binary file test-data/beta_phylogenetic_passthrough.test6.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/bray_curtis.test0.feature-table.qza |
| b |
| Binary file test-data/bray_curtis.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/bray_curtis.test1.feature-table.qza |
| b |
| Binary file test-data/bray_curtis.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/bray_curtis.test2.feature-table.qza |
| b |
| Binary file test-data/bray_curtis.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/faith_pd.test0.feature-table.qza |
| b |
| Binary file test-data/faith_pd.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/faith_pd.test0.phylogeny.qza |
| b |
| Binary file test-data/faith_pd.test0.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/jaccard.test0.feature-table.qza |
| b |
| Binary file test-data/jaccard.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/jaccard.test1.feature-table.qza |
| b |
| Binary file test-data/jaccard.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/jaccard.test2.feature-table.qza |
| b |
| Binary file test-data/jaccard.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/observed_features.test0.feature-table.qza |
| b |
| Binary file test-data/observed_features.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/pielou_evenness.test0.feature-table.qza |
| b |
| Binary file test-data/pielou_evenness.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/pielou_evenness.test1.feature-table.qza |
| b |
| Binary file test-data/pielou_evenness.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/shannon_entropy.test0.feature-table.qza |
| b |
| Binary file test-data/shannon_entropy.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/shannon_entropy.test1.feature-table.qza |
| b |
| Binary file test-data/shannon_entropy.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/shannon_entropy.test2.feature-table.qza |
| b |
| Binary file test-data/shannon_entropy.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test0.feature-table.qza |
| b |
| Binary file test-data/unweighted_unifrac.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test0.phylogeny.qza |
| b |
| Binary file test-data/unweighted_unifrac.test0.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test1.feature-table.qza |
| b |
| Binary file test-data/unweighted_unifrac.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test1.phylogeny.qza |
| b |
| Binary file test-data/unweighted_unifrac.test1.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test2.feature-table.qza |
| b |
| Binary file test-data/unweighted_unifrac.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test2.phylogeny.qza |
| b |
| Binary file test-data/unweighted_unifrac.test2.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test3.feature-table.qza |
| b |
| Binary file test-data/unweighted_unifrac.test3.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/unweighted_unifrac.test3.phylogeny.qza |
| b |
| Binary file test-data/unweighted_unifrac.test3.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test0.feature-table.qza |
| b |
| Binary file test-data/weighted_unifrac.test0.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test0.phylogeny.qza |
| b |
| Binary file test-data/weighted_unifrac.test0.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test1.feature-table.qza |
| b |
| Binary file test-data/weighted_unifrac.test1.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test1.phylogeny.qza |
| b |
| Binary file test-data/weighted_unifrac.test1.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test2.feature-table.qza |
| b |
| Binary file test-data/weighted_unifrac.test2.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test2.phylogeny.qza |
| b |
| Binary file test-data/weighted_unifrac.test2.phylogeny.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test3.feature-table.qza |
| b |
| Binary file test-data/weighted_unifrac.test3.feature-table.qza has changed |
| b |
| diff -r c31665c5069c -r a8f2491b6f44 test-data/weighted_unifrac.test3.phylogeny.qza |
| b |
| Binary file test-data/weighted_unifrac.test3.phylogeny.qza has changed |