Galaxy |

Changeset 1:a9ab1b0a00dd (2019-10-16)

Previous changeset 0:fcb7370e827f (2019-04-10) Next changeset 2:e0395cca2c57 (2019-12-12)

Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 8ef5f7c6f8728608a3f05bb51e11b642b84a05f5"

modified:
macros.xml

added:
test-data/manipulate.add_annotation_obs.h5ad
test-data/manipulate.add_annotation_var.h5ad
test-data/manipulate.filter_obs_key.h5ad
test-data/manipulate.filter_var_index.h5ad
test-data/obs_add_annotation.tabular
test-data/pp.neighbors_umap_euclidean.recipe_weinreb17.paul15_subsample.h5ad
test-data/pp.pca.krumsiek11.h5ad
test-data/tl.diffmap.h5ad
test-data/tl.draw_graph.h5ad
test-data/tl.paga.neighbors_gauss_braycurtis.recipe_weinreb17.paul15_subsample.h5ad
test-data/tl.rank_genes_groups.krumsiek11.h5ad
test-data/tl.tsne.h5ad
test-data/tl.umap.h5ad
test-data/var_add_annotation.tabular

diff -r fcb7370e827f -r a9ab1b0a00dd macros.xml
--- a/macros.xml Wed Apr 10 03:24:14 2019 -0400
+++ b/macros.xml Wed Oct 16 06:27:07 2019 -0400

@@ -1,11 +1,11 @@
<macros>
-    <token name="@VERSION@">0.6.19</token>
+    <token name="@VERSION@">0.6.22.post1</token>
     <token name="@GALAXY_VERSION@">galaxy0</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@VERSION@">anndata</requirement>
-            <requirement type="package" version="1.4">scanpy</requirement>
             <requirement type="package" version="2.0.17">loompy</requirement>
+            <requirement type="package" version="2.9.0">h5py</requirement>
             <yield />
         </requirements>
     </xml>

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/manipulate.add_annotation_obs.h5ad

Binary file test-data/manipulate.add_annotation_obs.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/manipulate.add_annotation_var.h5ad

Binary file test-data/manipulate.add_annotation_var.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/manipulate.filter_obs_key.h5ad

Binary file test-data/manipulate.filter_obs_key.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/manipulate.filter_var_index.h5ad

Binary file test-data/manipulate.filter_var_index.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/obs_add_annotation.tabular
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/obs_add_annotation.tabular Wed Oct 16 06:27:07 2019 -0400

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diff -r fcb7370e827f -r a9ab1b0a00dd test-data/pp.neighbors_umap_euclidean.recipe_weinreb17.paul15_subsample.h5ad

Binary file test-data/pp.neighbors_umap_euclidean.recipe_weinreb17.paul15_subsample.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/pp.pca.krumsiek11.h5ad

Binary file test-data/pp.pca.krumsiek11.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/tl.diffmap.h5ad

Binary file test-data/tl.diffmap.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/tl.draw_graph.h5ad

Binary file test-data/tl.draw_graph.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/tl.paga.neighbors_gauss_braycurtis.recipe_weinreb17.paul15_subsample.h5ad

Binary file test-data/tl.paga.neighbors_gauss_braycurtis.recipe_weinreb17.paul15_subsample.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/tl.rank_genes_groups.krumsiek11.h5ad

Binary file test-data/tl.rank_genes_groups.krumsiek11.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/tl.tsne.h5ad

Binary file test-data/tl.tsne.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/tl.umap.h5ad

Binary file test-data/tl.umap.h5ad has changed

diff -r fcb7370e827f -r a9ab1b0a00dd test-data/var_add_annotation.tabular
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/var_add_annotation.tabular Wed Oct 16 06:27:07 2019 -0400

@@ -0,0 +1,12 @@
+annot1 annot2
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